Acanthopagrus latus (yellowfin seabream): 119030802
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Entry
119030802 CDS
T08233
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119030802 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119030802 (nfrkb)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
119030802 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
119030802
NCBI-ProteinID:
XP_036974566
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All DBs
Position
13:8955064..8964670
Genome browser
AA seq
1278 aa
AA seq
DB search
MDALTHMLTDPLDPKEENDGQITEECMLGNCRVNLPEDLLEDPEIFFSVMSESTWSEVLS
DSQRQHLRQYLPQFPDNNVAEQDSTISDLFNNRDFNFGNPLHLAQKLFRDGYFNPEVVKY
RQLCAESQRKRQLYSLQQYYHRLLKQILVSRKELLEFAVHNGLDFPPKRKLPSKTHAEMR
EPRVRRRLSRILKEVKTECGDSNASSDDDDISLWTPAPQSPSSPTPIISLRVLPSLSTQD
MKTTEKIELGERDLKAMLQNHREKRKRQPDHPDLMTSDIHLGDILSRTNIGRKGTMPLFD
LSLPKKKIKDERKKKKMRTIKVESEDPCETLAPSDTPSAPPANIINSLPDTPSTPLPNIK
EEIVEECQSSPVMVEEIAVSFFSLLENILRTEHLSSTSMLEDKVQLWQSSPASSLNVWFS
AVPCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFSDDTQQWRWIGPTQDTEKDVSAL
CQLWLDSKDLVVKTENEDMLEITSPTPRVSTDYVVRPSTGDERQVFQIQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRSRS
QEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKDGGSKTPGCLEGGQDIGSIPMSPT
PTTPTITTPGTPKSPLPCTATTPTKTGVPDTIKSSPGVLLVSPPSLPQLGAILPSSQAAP
TVSQPVTSQHAARIVSHLAAGSLPQVRVVSTQSGLASSAGSQQATMVHQTPHQIRMPVSV
AAKGISQAVVSVPLRSQSASSPVHVPTTLSVSAVAMAKPQAGSPGSPANNPASPAVLQGV
ASPNIKQVSITGQLGMKTAGGAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITP
DMMATLAKSPVATVKLTPDFLSTATTGSKSISATLHVTSSHPSASSASVATSCTGEVQTS
KAGPVASTLLKAAGDTAIRLMPTLAVTVADQKSRTFSTVSSPDKSGATIRIMPGLGVIPQ
KQGQTITMTTTTGGKPLTASTCANVVTMAASVVAAAKGITVAPGASGSPLALGTATATVR
QVPASVVTTTTGKLPARITVPLSVLNQPLKSKSVVTTPIVKGSLNTNISSLGRNIILTTM
PAGTKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHMATGSPKSVSTVVV
TTAPSPKCAPDPPSAPQQ
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcacccacatgcttacagatcctctcgatccaaaagaagaaaacgatgga
caaatcacagaggaatgcatgctagggaactgtagagtgaatctcccagaggacctacta
gaggaccccgagattttcttctctgtgatgagcgaaagcacctggagtgaagttctgtca
gattcgcagaggcagcaccttcgtcagtatttgccacagtttcctgacaacaacgttgcg
gagcaggacagcaccatcagtgacctattcaacaacagagattttaactttggaaatccc
cttcatcttgcacaaaaacttttcagagatggttacttcaatcctgaggtggtcaaatac
agacaactgtgcgccgagtcccagaggaaacgacagttgtattcccttcagcagtattac
cacaggttgttgaagcagatcctcgtctccagaaaggagctgctggagtttgcagttcac
aatggcctggactttccaccaaaaagaaagttaccatctaagactcatgctgaaatgcgg
gagccaagggtgagaagaagactgagccgcatattaaaggaggtcaaaactgagtgtggg
gacagcaatgcttcatctgatgatgatgacatatcattatggactccggctccacaatcg
ccttcttctccgacaccaatcatctcactcagagttctacccagcctctccacccaagac
atgaagactaccgaaaaaatagaactaggggagcgggacttgaaagccatgctgcaaaac
cacagagagaagaggaaacgacagccagaccatccagacttgatgacctctgacatccac
cttggagacatactctcaagaacaaatatcggtcggaaggggaccatgccactctttgat
ctgtctctgcctaagaagaagataaaagatgagagaaagaagaagaaaatgaggacaata
aaagtggaatctgaggatccctgtgaaactctggcaccttcagacaccccatctgctcca
ccagcgaacatcatcaactcattgccggacacaccgtctactccactgcctaacataaag
gaggagattgtggaggagtgtcagagcagcccggttatggtggaggaaatagctgtcagt
ttcttcagcttgttggagaacatcttaaggacagaacacctgtccagtacttcaatgttg
gaggataaagttcaactgtggcagtcgtctccagccagctccctcaacgtgtggttttcg
gctgtcccgtgttggtctgacttggttcttcaagccctgcagtttcttgcaggagagacg
aaagatggcatgatggcactccccagcggcttttctccatttgtggaattttccgatgac
actcagcagtggaggtggattggccctactcaggatacagagaaggatgtcagcgcactc
tgtcagctgtggctggactccaaggatttagttgtcaagacagaaaatgaagacatgttg
gagatcacctctcccacaccaagagtttcaactgattacgtggtgcggcccagcactgga
gacgagagacaagtgtttcaaatccaggagcagcagcgatacaaccagccacataaagcc
ttcactttcaggatgcacggcttcgagtctgtggtggggccagttaaaggggtgttcgat
aaggagatgtctctcaacaaagcccgggagcacactctactgcgctcagaccgaccacct
tacgtcactattctctctttggtgcgggatgcagcagccaggttacccaatggagaggga
acaagggccgagatctgcgagctgctgaaagactcacagtttctagctccagatgtcact
agtgcacaggtgaacacagttgtcagtggggctctggatagacttcactatgagaaagac
ccctgtgtgaagtatgacatcggtcgcaaactctggatttacctgcaccgcagtcgcagt
caagaggagtttgagaggatccaccaggctcaagctgctgctgcaaaagcaagaaaagcc
ctacagcagaaacccaaacctgcatctaagccgaagtctggaagtaaggatggaggcagt
aaaactcctgggtgtctggagggaggacaagatattggctccattcccatgtcgccaacc
cctactacacccaccataaccacacccggaacccccaagtcacctttaccctgcacagcc
accactccaacaaagaccggagtcccagatacaatcaaatccagcccaggtgttcttctt
gtgtcccctccctcgttgccccagctgggcgccatattacccagcagtcaggctgctcca
actgtttcgcagccagtcacatcccaacacgcggccaggatagtgagtcacctggcggca
ggctccctccctcaggtgcgggtggtctccactcagtccggtcttgcttcttcggcagga
agtcagcaggccacaatggtacatcagacccctcaccagatcaggatgccggtgtcggtg
gcagccaagggaatttcacaggcagtggtttctgtacctctgaggagtcagtctgctagt
agtccggtccatgtgccgaccactctgtctgtgtctgccgtagctatggccaaacctcaa
gctggatcacctggtagcccagctaataaccctgcctcccctgctgtgttgcaaggggtc
gcaagcccaaatatcaaacaggtgtccataactggccagttgggaatgaagactgcagga
ggggcaggaatcccaataaccgccacgaacctgcgcatccagggtaaagatgtcctccgt
cttccaccatcctccatcaccaccgatgctaaaggccagacggtgctgcggatcacccca
gacatgatggcaactctcgccaaatccccagttgcaactgtcaaactcactcccgacttc
ctgagcactgccaccacaggcagcaagagcatatcagccactctccatgtgacgtcatca
cacccttcggcttcctctgcctctgttgctacatcctgtacaggggaggtacagaccagt
aaagcagggcctgttgcctctaccttgctgaaggctgcaggtgacacagccatacgccta
atgccgacattggccgtcactgtggccgaccagaaatcgaggaccttctcgaccgtgtcc
tccccggacaagagtggtgccaccattcggataatgccaggcctcggtgttataccacag
aaacagggtcagaccatcacaatgacaaccaccactggtggtaaaccactcacagcgtct
acgtgcgctaatgtcgtgaccatggctgccagtgttgtggctgctgcgaaggggatcaca
gttgctcccggagcttcgggctcaccgctggcgctaggaacagctacagccacagtgcgg
caggtccctgcctctgtggttactaccacaacggggaagctacctgcccggataactgtg
cctctctctgtcctcaaccaaccactgaagagcaaaagcgttgtgaccacacctattgtg
aaaggaagtctcaacacaaatatcagcagtctgggcaggaacatcatcctgaccacgatg
cctgctggcacgaagctgatcgcagggaacaaaccggtcagctttgtcacagcacaacag
ttccagcagcttcagcagcaaggacaggccacacaggttcgcattcagactgttcaggcc
cagcagctccagcagcacatggcaacaggctccccaaagtctgtttctacagttgtagtc
acaacagcaccttcacctaaatgtgcacctgatcccccgtctgcacctcaacagtga
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