Acanthopagrus latus (yellowfin seabream): 119030885
Help
Entry
119030885 CDS
T08233
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04142
Lysosome
alat04144
Endocytosis
alat05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119030885 (cltca)
04142 Lysosome
119030885 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119030885 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119030885 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119030885 (cltca)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
119030885 (cltca)
Exosome [BR:
alat04147
]
Exosomal proteins
Proteins found in most exosomes
119030885 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
119030885
NCBI-ProteinID:
XP_036974727
LinkDB
All DBs
Position
13:13519783..13551866
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGDQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPAG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
AEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQGVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQALTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASV
LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
ERHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLQ
ENKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESV
RKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYSQPAAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaacttagggatc
aatccagctaacataggcttcagcactctaaccatggagtcggataagttcatctgcatc
cgggagaaggtgggcgatcagactcaggtggtgatcattgacatggcggacccaaataca
cctatccgcaggcccatctcagccgacagcgccatcatgaatccagccagcaaagtcatt
gcacttaaagacgccgccaaaacccttcagatcttcaacatcgaaatgaagagcaagatg
aaggcacacaccatgacggacgatgtcaccttctggaagtggatctctcttaacacagtt
gcactcgtgactgacaatgctgtctaccactggagcatggagggtgactcacagcctgtg
aaagtctttgaccgccactccagcctggcaggttgccagatcatcaactaccgcactgac
gccaagcagaaatggctcctgctcatcggcatctcagcccagcaaaatcgggtggtagga
gccatgcagctctactctgttgacagaaaagtctctcagcccattgaagggcatgctgcc
agctttgcccagttcaagatggagggaaatacagaggagtccactttgttctgcttcgcg
gtcagaggccaggcaggaggaaagttgcacatcattgaagtggggaccccaccagctggc
aaccagccatttccaaagaaagcagtggatgtgttcttccctccagaagcccagaatgac
ttccctgtggccatgcagataagctccaagcaagatgtggttttccttattaccaaatac
ggctacattcacttgtatgacttggagacaggcacctgcatctacatgaaccgcatcagt
ggggagaccatctttgttactgctccacatgaggccacctcaggcatcattggggtcaac
aggaagggacaggttctttcagtctgtgtggaagaagaaaacatcatcccctacatcact
aacgtgctccagaatccagacctggctctgcgcttagctgtccgcaacaaccttgctggc
gcagaagagctctttgcacggaagttcaacaacctgtttgctgcgggtaactactccgag
gctgccaaggttgctgccaatgcacccaagggtattctgcgaaccccagacaccatccgt
cgtttccagggcgttccaactcagccaggccagacctcccccttgctgcagtactttggc
atcctgttggatcagggccagctcaacaagtttgagtccctggagctttgcaggcctgtt
ctccagcagggacgaaagcagcttctggagaagtggctcaaggaagacaagttggaatgt
tcagaggaactgggtgacctggtgaaggcagtggatcccaccttggctctcagtgtctac
ctgagggccaacgtccccaataaagtcatccagtgctttgcagagactggtcagttcccc
aagattgtcctgtatgccaagaaggtgggctacactccagactggatctttctgctcagg
aatgtgatgcggatcaaccctgaacaaggcctgcagtttgctcagatgctggtccaggat
gaagagccactggcagacatcacacagatcgtggacgtattcatggagtacaacctgatc
cagcagtgcacctcgttcctcctggacgctctgaaaaacaatagaccttcagaaggacca
ctgcagactcgcctcctggagatgaacctcatgcacgctccacaggttgctgatgctatc
ctgggcaaccagatgttcaccaactacgaccgtgcccacatcgcccagctttgtgagaag
gctggactcctgcaacgggcacttgagcactatacagacctgtacgacatcaagcgtgct
gtggtgcacacacacctgctcaacccagagtggctggtgaacttctttggctcgctgtca
gtggaggactctctggagtgcctcagggccatgctgtcagccaatatccgccagaacctg
cagatctgtgtccaggtggcttccaagtaccatgaacagctcaccacgcaggctctcact
gagctctttgagtctttcaagagctttgaaggtctgttctacttcctgggctctatcgtg
aacttcagtcaggaccccgaggttcacttcaaatacatccaggctgcctgcaagacgggc
cagatcaaagaggtggagaggatctgcagagagagcaactgctatgaccccgagcgtgtc
aagaacttcctcaaggaagccaaactcaccgaccagctgccactgatcatcgtctgtgac
cgttttgactttgtccatgacctggtcctctacctttaccgcaacaacctgcagaagtac
attgagatctatgtccagaaggttaatcccagccgtctgcctgttgtggtcggtggtctc
ttagacgtggactgctccgaagatgtcatcaagagcctgatcctagttgtcaggggacag
ttctccactgatgaactggtcgctgaagtggaaaagaggaacagactgaagctgctgctg
ccctggctggagtctcgcatccatgaaggctgtgaggagcctgccacccataatgctctg
gccaagatctacattgacagcaacaacaaccctgaacgcttcctgagggaaaacccattc
tatgacagccgcgtggtgggaaagtactgcgagaagagagacccgcacctggcctgtgtg
gcctacgagagaggacagtgtgatcaggaactcatcaatgtctgcaacgagaactccctc
ttcaagagcttgtcacgctacttggtccgccgcaaagaccctgacctttgggccagtgtg
ctgctggagagcaaccccttcagacgaccactcattgaccaggtggtacagacagccctg
tcagaaacccaggacccagaggaggtgtcagtcactgtcaaggccttcatgacagcagac
ttgcctaacgagctcattgagctgctggagaagattgtgttggacaactcagttttcagt
gagcacagaaatctgcagaacctgctgatcctcacagcgatcaaagctgaccgtactcgt
gttatggagtacatcagcaggctagacaactatgacgctccagatatcgccaacattgcc
atcagcaacgagctcttcgaggaggcttttgccatcttcaagaagtttgacgtcaacacc
tctgctgtgcaggtgctgatcgaacatattggcaacctggaccgggcctatgagtttgca
gaacgctgcaatgagccggctgtgtggagccagctggctaaggctcagttacagaaggac
ttggttaaagaggccatcgactcctacatcaaagctgatgatccctctgcatacatggag
gtggtacaggctgctgataagagcggtaactgggaggacttggtcaaattccttcagatg
gcacgtaagaaggcccgtgagtcctacgtggagaccgagctaatctttgccttggccaag
acaaatcgcctggctgaactggaggagttcatcaacggacccaacaatgcacacatccaa
caggttggtgaccgctgctacgatgagaaaatgtacgaggctgctaaactgctatacaac
aacgtctccaacttcggccgtctggcttcaactctggtgcacctcggggagtaccaggcc
gctgtcgatggcgcccgcaaggccaacagcacccgcacctggaaagaggtgtgcttcgcc
tgcgtggatggcaaggagttcagactggcccagatgtgcggcctccacatcgtggtgcat
gctgacgagcttgaggagctgatcaactactaccaagatcgcggctactttgaggagctg
atcaccatgctggaggccgccctgggcctggaacgcgcccacatgggaatgttcacagag
ctggccatcctttactccaagttcaagccacagaagatgagggagcatctggagctcttc
tggtccagagttaacatcccaaaggtcctgagagcggcggagcaggctcacctgtgggcc
gagctggtcttcctgtacgacaagtacgaggagttcgacaatgccatcatcaccatgatg
aaccacccgacagatgcctggaaggaggggcagttcaaagacatcatcaccaaggtggct
aatgtggagctgtactacaaagccacccagttctatttggagttcaagcccttgttactg
aatgatttgctcatagtgctttccccaagactggaccactcccgcgctgtcaacttcttc
agcaaggtgaaacagctgcctttggtcaaaccctacctgcgatcagtacagaaccacaac
aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaggattatcaggca
ctgaggacatcaatagatgcctacgataactttgacaacatctcgctggcccagcgcttg
gagaggcacgagctgattgagttcaggagaatcgctgcttacctcttcaagggcaacaac
cgctggaaacagagtgtggagctctgtaagaaggacaagctctataaggatgccatgcag
tatgcgtcagagtccaaggacatagagctggcagaggagctgctggcctggttcctgcag
gagaacaagaaggagtgttttgccgcctgcctgttcacctgctacgacctgctgcgacct
gacgtggtgctggagaccgcctggaggcacaacatcatggacttttctatgccatacttc
attcaggtcatgagggagtacctcagcaaggtagataaactagaaacctcagagtctgta
aggaaagaagaggagcaggcaacggagacacaacccatcgtctatggcacacctcagctg
atgctgacagcaggccccagcgtacctgtggcccctcagcaagcatacggctacggctac
caggcgcctgcaggatacagtcagccagcagctcagccaggcttcggctacggcatgtaa
DBGET
integrated database retrieval system
