Acanthopagrus latus (yellowfin seabream): 119030981
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Entry
119030981 CDS
T08233
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040
Spliceosome
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119030981
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119030981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119030981
Spliceosome [BR:
alat03041
]
Common components
Common spliceosomal components
SR proteins
119030981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
119030981
NCBI-ProteinID:
XP_036974912
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All DBs
Position
13:complement(9705308..9709273)
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AA seq
244 aa
AA seq
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MSGGGVVRGPAGSNDCRIYVGNLPPDIRSKDIEDLFYKYGAIRDIDLKNRRGGPPFAFVQ
FEDPRDSQDAVSGRDGYDYDGYRLRVEFPRSGRGGGGGGGGGGGMGPPRSRHGPPSRRSD
YRVVVTGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMSYAVRKLDNTKF
RSHEGETAYISVRTDGPRSPSYGRSRSRSRSRSKSRSRSYSPRRSKGSPRYSPRRSRSRS
RSRT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaggaggtgtagttcgaggacccgcagggagcaacgactgtcggatatacgtc
gggaatctcccgcctgatatccgctcaaaggacatcgaagacttgttttataaatatgga
gccattcgtgatatcgatctcaaaaaccgaagaggaggaccgccgtttgcctttgtgcag
ttcgaggacccgagggattctcaagatgctgtcagcggccgtgatggttatgactacgat
ggctaccgcctgcgtgttgagtttcctagaagtggaaggggaggcggtggtggaggtggt
ggtggcggtggaatgggacccccaaggtcaaggcatggtcccccctccagacgctccgac
tacagggttgttgtgacaggcctacctcccagtggaagctggcaggacctgaaggatcac
atgcgagaggcaggtgatgtatgttatgctgatgtgtaccgtgatggcaccggagtggtg
gagtttgtacgcaaagaagacatgtcctacgctgtccgtaaattagataacaccaagttt
cgctctcatgagggagagactgcctacatttctgtgaggacggatggtcctcgcagcccc
agctacggtcgttcccgctctcgtagtcgcagccgaagcaagagcaggtctcgcagctac
tcccctcgtcgcagcaaaggctctccacgctactctccccggcgttcccgctcccgttct
cgctctcgcacctag
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