Acanthopagrus latus (yellowfin seabream): 119030982
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Entry
119030982 CDS
T08233
Name
(RefSeq) serine/arginine-rich splicing factor 1-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040
Spliceosome
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119030982
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119030982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119030982
Spliceosome [BR:
alat03041
]
Common components
Common spliceosomal components
SR proteins
119030982
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
CoV_nucleocap
SDP_N
Motif
Other DBs
NCBI-GeneID:
119030982
NCBI-ProteinID:
XP_036974914
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All DBs
Position
13:complement(9699456..9703306)
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AA seq
239 aa
AA seq
DB search
MSGGGVIRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGIIRDVDLKNRTGGGPPFAFV
EFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRAGGGASGPPRGRYGPPSRHSEYRVVV
SGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMSYAVRKLDNTKFRSHEG
ETAYIRVKMDGARSPSYSRSHSRSRSRSRSNSMSRSYSPCRSRGSPHYSPHRLRSRSRT
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggaggtgtcattcgtgggccggcaggtagtaacgactgtcggatatacgtg
ggcaacctgccacctgacatccgcaccaaagacgtagaggacgtgttttataaatacgga
atcattcgggatgttgatctgaaaaaccggacaggaggaggaccaccgtttgccttcgtt
gaattcgaggacccgagggatgcggaggatgccgtgtatggacgtgacggttacgactac
gatggctaccgtctgcgtgtggagtttccccgaagtggcagggcaggtggtggagcttca
ggaccaccgaggggaaggtatggtccaccttcacgacactccgagtacagggttgttgtc
tcaggccttcctcccagtggtagctggcaggacctgaaggatcacatgcgagaggcaggt
gatgtatgttacgctgatgtgtaccgtgatggcaccggagtggtggagtttgtacgcaag
gaagacatgtcctacgctgtccgcaagctggataacactaagtttcgctctcatgaggga
gagacggcctacattcgtgtgaagatggacggtgctcgcagccccagctacagtcgctct
cattctcgtagccgcagtcgaagccggagcaacagcatgtcacgcagctactccccatgt
cgcagtagaggctcaccacattactcgccacaccgtctccgctcgcgctctcgcacctaa
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