Acanthopagrus latus (yellowfin seabream): 119031013
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Entry
119031013 CDS
T08233
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03030
DNA replication
alat03410
Base excision repair
alat03420
Nucleotide excision repair
alat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119031013 (rfc3)
03410 Base excision repair
119031013 (rfc3)
03420 Nucleotide excision repair
119031013 (rfc3)
03430 Mismatch repair
119031013 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alat03032
]
119031013 (rfc3)
03036 Chromosome and associated proteins [BR:
alat03036
]
119031013 (rfc3)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119031013 (rfc3)
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119031013 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
119031013 (rfc3)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119031013 (rfc3)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119031013 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
119031013 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
DUF2247
ABC_tran
Motif
Other DBs
NCBI-GeneID:
119031013
NCBI-ProteinID:
XP_036975010
LinkDB
All DBs
Position
13:11859194..11862427
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWLDKYRPTSLGKLDYHKELAAQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIGPIRSRCL
AVRVPLPSTEEVCNVLTSVCKKEGLLLPPELAKQIAEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPSTDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDVIMKGLVKELL
SNCDGQLKTEVAHMAAFYEHRLQLGSKSIYHLEAFTAKFMAIYKKFMEDGLDGMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtggctggacaaataccgacccacctccctcgggaaactcgactatcacaaa
gagctagcagctcagctcaaaaacctggttcaatgtggcgacttcccgcacctgttggtg
tacggtccatccggcgccgggaagaagacccgcatcatgtgtctgctgagggagctgtac
ggagccggggtggagaaacttcgcatagagcaccagagcatcgtggctccctcaaagaag
aaaattgagatcaacaccatagccagcaactaccacttggaagtcaacccaagtgatgct
ggtaatcaggaccgtgtggtgattcaagagctgattaaaaccgtagctcagtcacaacag
atccagtcaagcacccagagggagttcaaagtggtgttgctgacagaggtggaccgactc
acgaaagacgcgcagcacgctttgcgtcggacaatggagaagtacatgtccacctgccgt
ctcatcctgtgctccacctccacctccaaagtgatcgggcccattcggagccgttgtctg
gctgtccgagttcctctgccgagcacagaagaggtttgtaatgttctgacatcagtctgt
aaaaaagagggtctgctcctcccacctgagctggccaaacaaatcgctgagaagtccggt
cgcaacctccgcaaagcccttctgatgtgcgaggcctgcagggtgcagcagtatccattc
tcggtggaccaagatgtcccgtcaacagactgggaggtctacctcagagagactgctaat
gccatcgtcagccagcagagccctcagaggttgttggaggttcgagccagactgtacgag
ctgctgacacactgcatccctcctgacgtcattatgaagggtctggtaaaagagctactc
agtaactgcgacggccagctgaagacagaggtggctcacatggcagccttctatgaacac
agactgcagctgggcagcaaatctatttaccaccttgaggcatttaccgccaagttcatg
gccatctacaagaagttcatggaggatggtctggatggcatgatgttttaa
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integrated database retrieval system
