Acanthopagrus latus (yellowfin seabream): 119031073
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Entry
119031073 CDS
T08233
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119031073 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119031073 (prpf8)
Spliceosome [BR:
alat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119031073 (prpf8)
Complex C
U5 SnRNP specific factors
119031073 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
119031073
NCBI-ProteinID:
XP_036975106
LinkDB
All DBs
Position
2:15898861..15914593
Genome browser
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPAGMPPGVPPPAPVPDYMSEEKLQEKARKWQQLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDTEEDSSCVEWFYEHQPLKDTTKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaccttcccctacagaggcgtccctgcagggatgccgccaggtgtaccccct
cctgcgccggtcccagactacatgtccgaggaaaaactgcaagagaaagcaagaaaatgg
cagcaattgcaggcaaagcgctactcagaaaagagaaagtttggctttgtggatgctcag
aaggaagacatgccacctgagcatgtccgcaagatcatcagggaccatggagacatgacc
aataggaagtttcgccatgacaagagagtttacctgggtgctctcaagtacatgccccat
gcagtgctgaagctgctggaaaacatgcctatgccctgggaacagatcagagatgtgccg
gtcctctaccacattactggagctatttcctttgtgaatgaaatcccctgggtcatcgag
ccagtctacatcgctcaatggggcactatgtggatcatgatgcgtcgtgagaagcgtgat
cgtcggcacttcaagaggatgcgctttccaccatttgatgatgaggagccgccgcttgac
tacgctgacaacatccttgatgtggagccactggaggccatccagatggagctggacacc
gaggaggactcttcatgtgtggagtggttctatgagcaccagcccctcaaagataccacc
aagtttgtgaacggcaccacctaccgccgctggcagttcacactgcctatgatgtccaca
ctgtaccgcttggccaatcagctgctgacagacctggtggatttcaactacttttatctg
tttgaccttaaggccttcttcacttccaaggctttaaatatggctatccctgggggaccg
aagtttgagccactggtcagagacatcaacctccaggacgaagactggaatgagttcaac
gatatcaacaagatcatcatccgacagcccatcaggacagaatacaaaatcgcattcccc
tacctgtacaacaacttgccgcaccatgtccacctcacctggtatcatacaccaaacgtg
gtgtttatcaagacggaggatccagatctcccagcgttctactttgacccgctgatcaac
cccatttcacacagacattctgtcaagagtcaggagcctctgcctgatgacgatgaggag
tttgagcttcctgagtatgtggagcccttcctcaaggagaccccactctacacagacaac
acggccaatggcattgctctcctgtgggcaccgaggcccttcaacctcagatcggggcgt
acgaggcgtgccattgacatccccctgatcaagaactggtaccgtgagcactgcccagca
ggacagccagtcaaagtgcgagtttcgtaccagaaactgctcaagtactatgtgctcaat
gccctcaaacaccggccaccaaaggctcagaagaagaggtatctgttccgctccttcaag
gccaccaagttctttcagtccaccaagctggactgggtggaagtgggcctgcaggtttgc
agacagggttacaacatgctcaacctgctgatccatcgtaaaaatctaaactacctgcat
ctcgactacaacttcaacttgaagcctgtcaagacactgaccacaaaggaaagaaagaag
tctcgattcggtaatgccttccacttgtgcagagaggtgctgcgtctgagcaagctggtg
gtggacagtcatgtgcagtacagactgggaaatgttgatgccttccagttggctgatgga
ctgcagtacatcttcgctcatgttggtcagctgacaggcatgtaccgctacaagtacaag
ttgatgagacaaatcaggatgtgcaaagatctgaagcatctcatctactataggttcaac
actggtcctgtgggaaagggcccaggttgtggcttctgggctcccggctggagagtgtgg
ctgttcttcatgagaggaatcactccgcttttagagaggtggctgggaaatctgctggcc
aggcagtttgaaggacgtcactctaagggcgtagccaagacggtgaccaaacagcgtgtg
gagtctcactttgacctggagttgcgtgctgctgtgatgcacgacatcttggacatgatg
cccgagggcatcaaacagaacaaggccagaaccatcttgcagcacctcagtgagtcctgg
cggtgctggaaggccaacatcccctggaaggtgccaggcctgcccactcccattgagaac
atgatcctgcgctacgtgaaggctaaagctgactggtggaccaacactgcccactacaac
cgtgagcgaatccgccgtggagccactgtggacaagacggtgtgcaagaagaacctgggg
aggctgactcgtctgtacctgaaagctgagcaggagaggcagcacaactacctgaaggat
ggaccctacatcacagctgaagaggctgtagccatctacaccaccaccgttcactggctg
gagagtcggcggttctcacccatccccttccctccactgtcgtacaaacatgacaccaag
ctgctcattctggccttggagaggctcaaggaggcatacagcgtgaagtctcgactgaac
cagagtcagagggaggagctggggctgatagagcaggcgtacgacaatcctcacgaggcc
ctgtccaggatcaaacgtcatctgctcacccagagagccttcaaagaggtcggcattgag
ttcatggacttgtacagtcatctggtgcctgtgtacgatgtagagcccctggagaagatc
acggatgcctacctggaccagtacctgtggtacgaggcagacaaaagacgcctcttccca
ccttggatcaaacctgctgacactgaaccaccaccactgctggtctacaagtggtgccaa
ggcatcaacaacctgcaggatgtttgggagactgcagaaggagagtgcaacgtgatgctg
gagtcccgctatgagaagatgtacgagaagattgatctgactctactcaacaggctgctg
cgtcttattgttgatcacaacattgctgattacatgacagccaagaacaacgtggtcatc
aactacaaggatatgaaccacaccaactcctatggtatcatcagggggctccagtttgcc
tcattcatcgtacagtactacggcctggtgatggacctgctggtgctcggcctgcaccgt
gccagcgagatggctggcccacctcagatgcccaatgatttcctcagtttccaggacaca
gccactgagagcgcccacccaatcagactgtactgccgctacatcgaccgcatccacatc
ttcttcaggttctctgctgatgaggccagagatctgattcagaggtacctgactgagcac
ccagaccccaacaatgagaacattgtgggttataacaacaagaagtgctggccccgtgat
gcacgcatgagactgatgaagcatgacgtcaaccttggtcgtgctgtgttctgggacatc
aagaaccgtctgcccagatcggttaccacagtccagtgggagaacagctttgtttcggtc
tacagcaaagacaaccccaacctgctcttcaacatgtgtggctttgagtgccgcatcctg
ccaaagtgccgcaccagctatgaagagtttactcacaaagacggtgtgtggaacctgcag
aatgaggtaaccaaagagaggactgcgcagtgtttcttgcgtgttgatgatgagtcaatg
cagcgcttccacaacagagtgcgtcagatcctgatggcctctggatccaccacgttcacc
aagattgtgaacaaatggaacacggctctgatcggtctgatgacgtacttccgagaggct
gtggtcaatacccaggagctcctggacctactggtgaagtgcgagaacaagatccagaca
cgtatcaagatcggcctgaactccaaaatgcctagccgtttccctcctgttgtcttctac
actcccaaagagttgggtggccttggcatgctgtccatgggccacgtgcttattccacag
tcagacctgcggtggtccaagcagacagacgttggtatcacccacttcaggtctggaatg
agccatgaagaagatcagctcattcctaacctttatcgatacattcagccatgggagagc
gagttcatcgactcccagagagtttgggccgagtacgccctgaagagacaagaggccatt
gctcagaacaggcgtctgaccctggaagatttggaggactcatgggaccgaggaattccc
cgtatcaacacacttttccagaaggacagacacacactggcttatgacaaaggctggaga
gtcaggacagatttcaaacagtatcaggtgctgaagcagaatccgttctggtggacccac
cagaggcacgacggcaaactgtggaacctgaacaactaccgcacagacatgatccaggct
ctgggcggcgtggagggcatcctagaacacacactcttcaaaggcacttatttccccacc
tgggagggtctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaag
ctgaccaatgcccagaggtccggcctgaaccaaatccccaaccgtcgctttacactttgg
tggtcacccaccatcaacagagccaacgtgtacgtgggtttccaagtacagcttgacctg
acaggaatcttcatgcatggcaagatccccacactgaagatctcactcattcagatcttc
agggctcacttgtggcagaagattcatgagagcattgtcatggatctctgtcaggtgttt
gatcaggagctggatgctctggaaattgagacggtgcagaaggagaccatccaccccagg
aagtcgtacaagatgaactcatcctgtgcagacatcctccttttcgcatcatacaagtgg
aacgtctctcgaccatctctgcttgctgactcaaaagacgtgatggacagcaccaccaca
cagaagtactggatcgacattcagctgcgctggggtgactacgactcccatgacattgag
cgttacgccagggccaagttcctggactacaccaccgacaacatgagtatctacccctcc
cccacaggggtgctcattgctattgacctggcttacaacctccacagcggctatggtaac
tggttccctggaagcaagcctctgatccagcaggccatggccaagatcatgaaggccaac
cctgccctgtatgtgctcagggagcgcatccgcaagggtctgcagctgtactcctccgag
cccactgagccctacctgtcctcacagaactatggtgaactcttctccaaccagatcatc
tggttcgtagatgacaccaatgtgtatagagtcacgatccacaagacatttgagggtaac
ttgacgacaaagcccatcaacggagctatcttcatcttcaaccccaggactggacagctc
ttcctcaagatcattcacacatctgtgtgggctggacagaaacgtctgggacagctggcc
aaatggaagacagctgaagaagtggctgccctgattcgctccctcccagtggaggagcag
ccgaaacagatcattgtcaccaggaagggcatgttggaccctctggaggtccacttgctt
gacttccccaacatcgtgatcaagggctctgagttgcagctgcccttccaggcctgtctg
aaggtagagaagttcggagacctgatcctgaaggctacagagcctcagatggttctgttc
aacctctatgacgactggctcaagaccatctcatcttacacagccttctctcgactcatc
ctgatcctcagagcgctccatgtcaacaacgaccgcgctaaggtgatcctgaaacctgac
aagacaacgatcacagagccccatcacatctggcccacgcttactgatgaggagtggatc
aaggtggaagtgcagctcaaagatctcattctggcagattatggcaaaaagaacaatgtg
aacgtggcctcgctgacacagtccgagatccgtgacatcatcctgggtatggagatctcc
gctccgtcacagcagcgtcagcagattgctgagattgagaagcagacgaaagagcagtcg
cagctcacggccacacagaccagaactgtgaacaagcatggtgacgagatcatcacctcc
accacctccaactatgagacacagaccttctcctctaagacagagtggagagtcagggcc
atatctgctgctaacctccatctgcgaacgaaccatatctacgtatcatctgatgacatc
aaagagacgggctacacgtacatcctgcccaagaatgtcctcaagaagtttatctgcatc
tcagatctgcgagcacagattgcaggctacctgtatggcaccagcccaccagacaaccct
caggtgaaggagatccgttgcatcgtaatggtgccacagtgggggacacatcagacagtc
cacttgccgaaccagctgcctggtcatgaataccttaaagaaatggagcccctcggctgg
atccatacgcagcctaatgagtcaccccagctgtccccacaggatgtcaccacccacgcc
aaggtcatggctgacaacccttcttgggatggagagaagaccatcatcatcacctgcagc
ttcacaccaggctcgtgcacgcttacagcgtacaagctgacacccagcggctatgagtgg
ggccggcagaacacagacaagggcaacaaccctaaaggctacctgccatcccactatgaa
agagtgcagatgctgctctctgaccgcttcctgggcttcttcatggtgcctggacaggtg
tcctggaactacaacttcatgggtgtgcgccatgaccccaacatgaagtacgacctacag
ctggccaaccccaaggagttctaccatgaagtccaccggccctcgcacttcctaaacttt
gcctcactgcaggagggtgagatctataatgcagaccgcgaggacatgtacgcctga
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integrated database retrieval system
