Acanthopagrus latus (yellowfin seabream): 119031153
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Entry
119031153 CDS
T08233
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119031153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119031153
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119031153
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119031153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8_fungal
PA
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
119031153
NCBI-ProteinID:
XP_036975292
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All DBs
Position
13:complement(12778579..12868551)
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AA seq
817 aa
AA seq
DB search
MTVPQRRLAGLWPWLLMAALQVVLGQPGLEPERPALRAVIKVALLNHDPTGKSITLEGVF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDSLSRPVVLVRAKDAEQLMGLVNKNEEAKVRIEIMVEQP
QSLHYDVGILLTIVLAILTIVLIFALRYKCKSNRTWDSVHQQTMRAISRLETKTYNSQGC
SGSQRHRAAWGSASSSNSSPVCAICLEDFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCP
LCMHNIMGTERQAQRNRLQQNPEQSQSFLHPQPYSSPRNHPFPQHAVPFSMRPLYPRGPS
GPYPSLGHYTGSSPRDTQTLRFLTSRPPGSGCGYHLPAEGPGRPHRIGGNCRTSTHHYTP
RRSCHNYRSSCPAQRSVSSSRLHHGASVMQQTSGAPAHSRQDEGSCSGGSYHTERSGYLA
DGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGSGRAP
RRNSLEACAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHGQGPSRGS
EEEQGAAAAAAPAAPVLDKDSPVCPPKHSPCQCPKPDPTDRPSPGAECQDHDPSSSTGPP
VLVSPIPLQLQPHCCHQGHGHPPAPLGRVSGCVLDGPSVRFHQSLDLQDDRSIHIHYGQG
SGFCCSPPELHPALLPVPLILDSGGMEDWPCCAGAHVVWQKRVQQARSEPQLLGPGTSMD
RPPCRFHPGPAAERNTDICLYCQTLHHNQGSEEESGV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagcccgagcggccggccctgcgagcggtcatc
aaggtggcactgctgaaccacgatccgacggggaagtccatcaccctggagggggtgttc
gtgggaggaagtgccggctacgcggagggaaaactaatgcagtatcaccctctgtctctg
tgcaacacaagcgaggatgagcgacaagagagtgacttcatcactattgtcaaactggag
cacagggtaccccgctgtctgccgctgctcgataaggctcgcatggcattggataaggga
gctcaggctgtgatatttgatgtcagtgatgatgccaatgctgccgccgagctgcgggaa
acagactccctttctcgtccagtggtgttggtgagggcgaaggacgctgagcagctgatg
ggcttggttaacaagaacgaggaggccaaagttcgcattgagatcatggtggagcagccg
caatctctgcactatgatgtgggcatcctgctcaccattgtccttgccattctgaccatt
gtgctgatcttcgctttacgctacaagtgcaagtccaacagaacctgggactctgtccat
cagcagaccatgcgggccatcagccgattggagaccaaaacctacaactctcagggctgc
tcgggctctcagcgccaccgtgcggcctgggggtcggccagcagctccaactcgagcccc
gtctgtgctatctgcctggaggacttccaggacgggcagcatttgaggatcatctcctgt
gctcatgagttccacaaagactgcgtcgacccctggctgctacaacaccgcacctgtccc
ctctgcatgcacaacatcatggggacggagcggcaggcgcagaggaacagactccagcag
aatccagagcaaagccagagtttcctgcaccctcagccttacagcagcccgcgcaaccac
cccttccctcagcacgccgttcccttctctatgaggcccctctaccctcgtggaccctct
ggaccctacccgtctctgggccactacactggctcctctcccagggacacccaaacatta
cgcttcctcaccagcaggccgcccggctccggctgtgggtaccaccttcccgcagaaggt
cctgggaggccccacaggattggaggtaactgcaggacttccacccaccactacacgccc
cgtcggtcctgccacaactatcgctcgtcctgtccggctcagcgcagtgtgtccagctcg
agactgcaccacggggcctccgtgatgcaacaaaccagcggagcacctgcccatagccga
caggacgagggcagctgctcgggtggcagctaccacacagaacgcagcgggtacctggct
gacgggccagcgagtgactccagctcagggccctgccatggctcctccagcgactcagtc
ctcaactgtactgacgtgtccctgcagggggtttatggcagctggtccaccttccgtagc
tctctgagtagtgactacgatccgtttgtgtattacgggccaggttctgggcgcgccccc
cgcaggaacagcctggaagcgtgtgcccaggcccggcctaggtctctagattctgtggtg
aacaaggcgggctgccccgaagaacagccacagactgtgttcagccacatccactaccac
cgccacagacaccaccactatgaggagggggagcacggccagggcccgagcagaggctca
gaggaggagcagggggctgctgctgcagctgctccggctgctcccgtcctggacaaagac
tcacctgtgtgccctcctaagcacagcccctgccagtgcccaaagccagaccccacagat
cggcccagtcccggggcagagtgtcaggaccatgatcccagcagctctacaggacctccc
gtcctggtgtccccaatccccttacagcttcaaccccactgctgccaccaggggcacgga
caccctcccgctcctctcgggcgagtgagtggctgtgtgctcgacggcccctctgttcgc
ttccaccagagcctggatctgcaggacgaccgtagcatccacatccactacggtcagggc
tcgggcttctgctgctctcctcccgagctgcacccagccctgctccccgtgcccctcatt
ctagactctggaggtatggaggactggccttgctgtgccggggcacacgttgtgtggcaa
aagcgggtgcagcaggcccgatctgagcctcagctcctggggccggggacctctatggac
aggccaccctgcaggttccaccccggccctgctgctgagcgcaacacagacatttgtttg
tactgccaaacattgcaccacaatcagggatcagaagaggagtctggtgtgtga
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