Acanthopagrus latus (yellowfin seabream): 119031251
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Entry
119031251 CDS
T08233
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119031251 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119031251 (nup98)
03036 Chromosome and associated proteins [BR:
alat03036
]
119031251 (nup98)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119031251 (nup98)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119031251 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
119031251
NCBI-ProteinID:
XP_036975488
LinkDB
All DBs
Position
13:complement(26456989..26482290)
Genome browser
AA seq
1834 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTSSTFGAQNAGFGTAGGFGTSAFGATTNAGGLFGTTQNKPAG
GLFGSSTFSQPATSSTSTGFGFGAASGTSTSLFGSSATGTTGGLFSQQNNAFGANKPTSF
GSFGTSTSSGGLFGATNTASNPFGGATSLFGGSGFSAAQQPGTTVKFNPPTGSDTMVKAG
VTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAAATGSLFGSAPATSSTA
TGLFGAAAPNSSFSFGQNKTTFGAAPAATGGFGTATGGLFGQTAQPQAASLFKPFGQATT
TQSTGFSFGNTNTMGQANTSSMGLFGNTAAPQASGLFGAAQTSTATGFGTGTGLFGQTNT
GFGNVGTQQSLFNKTAGFGTTTTSAPSFGTGTGLFGNKPTLTLGTGTNTSTFGFGANPAA
GSLFGNKPATGGLGTGLGTSFGTAVGTGQTTLFGNNQNKLGSTLGAIGTFGATGFNSGAS
TLGFGAPQQPVALTDPSAAAAQQAVLQQQLSILAYSPYGDSPLFRNQLSDPKKKEERLKP
TNPTAQKALTTPTHYKLTPRPATRVRPKALSSSGASKSQLFDGLDDDEPSLTNGAFVPRK
SIKKLVLKNLNSSQYNSPINKETDDLASPSEYPQNGHSHMMEEEELREEPGPGRADDDPE
VTQFYVNPIAKPIPQGRVQTSLQDTISDLNMHKQARNGLELSSEDVSASLGEESLQEDRE
EEQQETQQAPHPAGIVLNRVGYYTIPSMEDLADMVDENGDCVVENFSIGRKGYGSIFFPG
EVNVTGLNLDEIVHFRRKEVIVYPDDKNKPVEGEGLNRRAEVTLDGVWPNDKTTCTQIRS
PERLTEMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEDVPLKTD
SKKLKTMSLPPSRLQQQLPPSQQQVAPQAQSTVVVDLPGGMAELDSDMADITQSFPTESM
LGGEEDSELLAGEMDTSGGKLGGLISAEHDGISASSHMASSLGINPHTLQIMKASLFAED
EEESEMFQDHGAMKVAPDVSSPRIILPGTQSRPSVGGLLQARFTSGLLSQLSDSPRPPLS
RGSPAAVEPPRQLHWAGPGPSSFVLPPRAPEPSIRTVGVRRLGGPVPLKESVTRGKGSLL
MDAGLFVGRSFRVGWGPGWTLAHCGQRLTSPMGKQLEQEELMAKTDFSFPPKPARSKPLI
DGSYKVTLEQLVGLQAPAVKISEEEEDESQAVLQRPLEICLKHSTVDTTDASACPLVRPQ
TGVAALHEYAEWITELNDKRGDADPLLGYWSEVWTLCEALWGRLGPADQEPDVETSSEYE
QQLERRRTFSDWLSRGATSRVKEEVALAGKGSHTEAIFSYLTGNCISEACRLAQKEGDHR
LSLLLSQAVGSQYCRELLALQLADWNRMQTDCYLPEERLRIFALLAGKPVWQSSDSVVNV
CSELDWKRSVAVHLWFMLPPTASVADALAKYEAAFQGSCEGGKYACAPLPPYMEAEQLDM
EDEEEESKRPLHDLCFHLLKLYSDRHYSLQQLLDPLTVTWERLDYRLSWHLWGVLQALHY
SHLSGSRQGLLHTSYAAQLESAGLWHMAIFILLHIPDHSQRERAVREMLTLHCPLQETDE
SVRRERFLTERLQIPEQWIHEAKATRARRDGDRHQEALHLYRARYWSQCHRLLIQHLASD
CIINDNHDYLLEFLEGLAVPEHSATIQDWDTAGRVYLDYIRVIKTLQNIQQMDNAGYELE
RLHTDVTSLCSRIELLPCSTARDRLAQSEMAKRVANILRVVLSLQQGDAASDSLSIPLTQ
LAPHITRLPMPEDYTLEELRGLTQSYLRQLIVSQ
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttggtactcccttcggaggaggaacaggggggtttggcacgtca
tcgacctttggagcacaaaatgcaggttttgggacggcaggaggctttgggacgtctgcg
tttggggccaccaccaacgctggaggactgtttggcaccacacagaataagcctgcaggc
ggtctgtttggatccagtacattcagtcaaccagcaacttcctccaccagcacaggtttt
ggatttggtgcagcgagtggcacttcaacaagcctgtttggcagcagtgcaacgggcacc
actgggggactcttttcccaacagaacaatgcttttggagccaataaacccacctctttc
ggaagctttgggacaagcaccagcagtggtggactgtttggggcgaccaacactgcctcc
aaccctttcggtggagcaacctccctgtttggaggctctgggttctctgctgcacagcag
ccaggaacgaccgtaaaattcaatcctccaacaggaagtgacacaatggtgaaagcaggt
gtgaccacgagcatcaacaccaagcaccagtgcatcacagccatgaaggagtatgagaat
aaatccctagaggagttgaggctggaggactaccaggcgggcaggaaaggcccaaccaac
ccaatggctgcagcaacgggcagtttgtttggatcagctccggccacatccagcaccgct
actggcctgttcggtgccgctgcccccaacagcagtttctccttcggacagaataagacc
acctttggagcggcacctgcagccactggtgggttcggtacagctactggcggtctgttt
ggtcagactgcgcagccacaagccgccagcctcttcaagcccttcggtcaggccaccacc
acacagagcaccggcttctcctttggcaacaccaacacgatgggacaggccaacactagc
agcatgggtctgtttggtaacacggcagcgcctcaggcgagtgggttgttcggcgccgct
cagacgagcaccgccactggctttgggacgggcactgggctgttcgggcaaaccaacact
ggatttggaaatgtcggcactcaacagagtttatttaataagacagctgggttcggcacc
accaccaccagcgctccatcctttggcaccggcaccgggctgtttggcaacaagcccacc
ctcactcttgggactggaaccaacacctccacctttggttttggtgcaaaccctgctgca
gggagtctgttcgggaacaagccagccactggaggtctcgggaccggactaggaaccagc
tttggaacagcagtgggcacagggcagacgactctctttgggaacaaccagaacaaactg
ggctccacactcggagcaattggaacattcggagcaactggattcaacagcggagccagc
accctgggcttcggagctccacagcagcctgttgctctcacagatccaagtgcagctgct
gcccaacaggccgtgctgcagcagcagctcagtattctggcgtactcgccttatggagac
tcgccactgttcagaaaccagctgtcagaccccaagaagaaagaggagcgtttgaaacca
acaaatcccacggcccagaaggctctgaccacacccactcactacaagctgaccccccga
cctgcgaccagagtccggcccaaagctctgtcgtcctcaggtgcctccaagtcacagctg
ttcgacggcctcgacgatgacgaaccgtctctgacaaacggagccttcgtacccaggaag
agcatcaagaaactggtgctgaagaacctgaacagcagccagtacaacagtccaatcaac
aaagagacagatgacctcgcctcgccatcagagtacccacagaatggacacagtcatatg
atggaggaggaggagctgagggaggagccaggtcccggacgggcagacgacgacccagag
gtcacccagttctatgtcaacccaatcgccaagcccatcccgcagggccgggtccagacc
agcctgcaggacaccatcagtgacctcaacatgcacaaacaggccaggaatggactcgag
ctgagcagtgaagacgtgtcggcgtcccttggggaggagtccctgcaggaggacagagag
gaggagcagcaggagacccaacaggctccccacccagcaggcatcgttctgaaccgtgtt
ggttattacaccatcccctcgatggaggatcttgctgacatggtggatgaaaatggagac
tgtgtggtggaaaacttctctattggcaggaaaggctacggctccatcttcttccctggc
gaggtgaacgtgacaggactgaacctcgacgagatcgtccacttcagacgcaaggaggtc
attgtgtacccagatgacaaaaacaagccggtggagggggaggggcttaataggcgagcc
gaggtgacgctggacggtgtgtggccgaatgacaaaacaacctgcactcagatcaggagc
cccgagcgtctgactgagatgaactacgaggggcggctggagaaagcctcccgcaaacag
ggagctcgattcctggagtacagacctgagaccggatcctgggtgtttgaggtggcccac
ttctccaaatatggcctccaggactctgacgaagacgaggacgtcccgctaaaaaccgac
tccaagaagctgaagacgatgtcgcttcctccctccaggctgcagcagcaactgcctccg
tcccagcagcaggtggcgccacaggctcagtccaccgttgtcgtggatcttccaggtggt
atggccgagctggacagcgacatggccgacatcacccagagcttcccaacagagagcatg
ctgggaggagaggaggacagtgagctgctggcgggagagatggatacgtcaggcgggaag
ctcggaggtttgatctctgcggagcacgacggcatctctgcgtccagccacatggcgtcc
tcgctggggatcaacccgcacaccctccagatcatgaaggcatctttgtttgctgaagat
gaggaggagagcgagatgtttcaggatcatggagcaatgaaggtcgccccggatgtctcg
tctccccgcatcatcctgccaggaacccagagccgaccgtccgtgggaggtctccttcag
gctcgttttacctctggactcctctctcagctgtcagattctcctcgccctcctctgtct
cgggggtctccagcagctgttgaaccccctcgtcagttacactgggccgggccgggccca
tcgtccttcgtgctgccccctcgcgctccagagccttcgatcaggacggttggcgtccgg
cggctgggcggccctgtccccctcaaagagtcggtgactcgagggaaggggagtttgttg
atggatgctggactgtttgtgggtcgttcctttcgggtcgggtggggtcccggctggacg
ctggcacactgtggccagcgtctgacctcgccgatgggcaaacagctcgagcaggaagag
ctgatggccaaaactgacttcagcttcccaccaaaacctgccaggagcaaaccactgata
gacggctcctataaggtgacgttggagcagctggtgggtctgcaggctccagcagtgaag
atcagtgaggaagaggaggacgagagccaggcggtgctgcagcgccccctggagatctgt
ctgaagcacagcaccgtcgacacaacagacgcctccgcctgccctctggttcgaccacag
accggcgtggcggcgctgcacgaatacgccgagtggatcaccgaactgaacgacaagcgg
ggcgacgcagatcccctactgggttactggtctgaggtctggacgttgtgtgaggccttg
tggggccggttgggcccagcagatcaggagcccgatgtcgagacgtccagcgagtatgag
cagcagctggagaggagacggaccttctcggactggctgtcccgcggagccacctccagg
gtgaaggaggaggtggcgctggcggggaagggcagtcacacggaggccatcttcagctac
ctgactggcaactgcatcagtgaggcctgtcgactggcacagaaggaaggagaccaccgt
ctgtccctgctgctgtctcaggccgtcggctctcagtactgccgagaactgctcgcgctt
cagctcgccgactggaaccgcatgcagaccgactgctacctgcctgaggagcgactgcgc
atcttcgcactgctcgccgggaaacctgtgtggcagtcgtcggactctgtggtgaacgtc
tgctccgagttggactggaaacgctccgtggccgtccatctctggttcatgttgcccccg
actgcctcggtggctgacgccctcgccaaatatgaagctgccttccagggctcatgtgag
gggggaaagtatgcctgcgccccccttcctccatacatggaggcggagcagctggacatg
gaggacgaggaggaggagtctaaacggccactgcacgacctctgcttccacctgctcaaa
ctctacagtgacagacattacagcctgcagcagctgttggacccgctgaccgtcacctgg
gagcggctggattaccgtctgagctggcacctgtggggcgtcctgcaggcgttgcactac
agccacctgagcggctcgcggcagggactcctccacaccagctacgccgcacagctggag
agcgccgggctgtggcacatggccatcttcatcctgctgcacatccccgaccacagtcag
cgggagagagcggtgagggagatgctgaccctccactgccccctgcaggagacagacgag
tcagtccggagggagcgcttcctgaccgagaggctgcagatccccgagcagtggatccat
gaggccaaggctacccgagcccgccgcgacggtgacagacaccaggaggcgctgcacctc
taccgggccagatactggagccagtgtcaccggctgctgatccaacacctggcctcagac
tgcatcatcaacgacaaccatgactacctgctggagttcctggagggtctggcggtccct
gaacacagcgccaccatccaggactgggacactgcagggagggtttacctggactacatc
cgagtcatcaagactctgcagaacatccaacagatggacaacgctggttacgagctggag
cgtcttcacaccgacgtgacgtctctctgcagcagaatcgagctgctgccctgcagcacc
gccagagaccgcctcgcccaatcagaaatggcgaagcgtgtggccaacatcctgcgtgtg
gtgctgagcctgcagcagggcgacgcagcatccgactccctcagcatcccgctcacccag
ctggcgccgcacatcacccgcctgccaatgccggaggactacacgctggaggagctgcga
ggcctcacgcagtcgtacctgcgacagctcatcgtcagccaatga
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integrated database retrieval system
