Acanthopagrus latus (yellowfin seabream): 119031370
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Entry
119031370 CDS
T08233
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119031370 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119031370 (zgc:163098)
Spliceosome [BR:
alat03041
]
Complex A
U2 snRNP components
U2 related factors
119031370 (zgc:163098)
Complex B
119031370 (zgc:163098)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
CID
cwf21
CTK3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
119031370
NCBI-ProteinID:
XP_036975688
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Position
13:complement(8064012..8073692)
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AA seq
886 aa
AA seq
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MADRKGKPVTPVKTLRKKELDVLKKKEEEKAAEVFEEFLASFESSKKGRAKTFVRGGIVN
ATKAEEAEEVKKSKLYQPSTKLFSVAQHVSPVSSAESKKSTFKRRTEEKKKSNLELFKEE
LKLIQEEREERHKRKKNDPGGGGAGGGGGAAYGDLDIPLSGRSTLYDDLTVPTTTNLYIS
CISPKMNEEMLCKEFGKYGPLASVKIMWPRTDEERCRTSNRAFVAFMTRKDAERALAALD
GKVIMGFEMKLGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRDRFRNDFTKPLGM
SKGDLDKTLSEAVVKVVIPTERNLLFLIHRMIEFVVREGHVFEAVIMDKEKNNPDYRFLF
DNKSQDHVYYRWKLFSILQGESPTEWRSTDFRMFRGGSLWRPPILNNYSHRGEDKAEVEE
DAPPEEEVKKGQLRSEHRQRLETILTELTPSREDIANAMLFCLERADAAEEVVGNITESF
SLLQTPLQKKIARLYLVSDILHNSCAKVAGASYYRKYFEPKLTQIFEGLNAAHKNIQARL
QAEQFKQKVMSCFRAWEDWAIYPEPYLIHLQNVFLGYAKAVEEPTETAEVVSFDLDGAPM
DSTPIDGLPLDRAPEDDLDGCPMGWGPLDGVSADDIDGVPLGVAVDDIDGMPLDESNVRL
SGVPLSKWETTGDVGTFSQAKTESKWNMVVQQDSEDEVNASVKSQDGGEDSESDSSDDSC
SSSKFESADFQSSLRSFQMSESKRKRLRELEVKVMKIQDELESGKRSRKTGMSLQQQVEH
YRNKLLQKEFEKDDKNETLTSKSKDKSKDDRREKERSRRNDDGDRRRQRSRDPDDHTRKS
RSISPLKTRSPKWSKRSRSPSPNRKAGKSRSRSPHRSHKKAKKSKH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgtaagggaaaacctgtcactccagttaaaacactcaggaagaaggaacta
gatgtgctcaagaaaaaggaggaagaaaaagcagcggaggttttcgaggagttcttggca
tcgtttgagagcagcaagaaaggcagagccaagacctttgttcgtgggggaatcgtgaac
gcaactaaagcagaggaagcagaggaggtcaagaaaagcaagctgtatcaaccttctacc
aagttgttctctgtggcccagcatgtctcaccagtgtcatctgctgaaagcaaaaagtct
acgttcaaaagaaggacagaagagaagaagaagagtaatctcgaactcttcaaagaagaa
cttaagctaatacaagaagagcgagaggaaaggcataaaagaaagaaaaatgacccaggt
ggaggtggagcaggaggaggaggaggagctgcatatggagatctggacataccactgtca
ggacgatcaacgttatatgatgacctaactgtgccaaccaccactaacctctacattagc
tgcattagcccaaagatgaacgaggagatgctctgcaaagagtttggcaagtacgggccc
ttggccagcgtgaagatcatgtggccccgaacagacgaggagcgctgcaggacgtccaac
agagcctttgtggctttcatgacgcggaaagacgcagaaagggccctggctgcactcgac
ggtaaagttattatggggtttgagatgaagctgggctggggcaaaccagctcgcattcca
cctcagcctctctacacaccggtgggggtgcgggccacgccgccacccccgtccgggctg
ccgttcaacgctcagccgagggatcgcttccgcaatgacttcaccaagccactgggcatg
tccaaaggagatctcgacaagactctgtccgaagccgtagtcaaagtggttatcccaacc
gaaaggaatctattattcctcatacacaggatgatagagtttgtggtgcgtgaaggccac
gtatttgaagctgtaataatggacaaggagaaaaacaatccagattataggtttcttttt
gacaacaaaagccaagatcacgtgtactatcgttggaagctgttctccatcctgcaggga
gagtccccgacagagtggaggtcaacagatttccgtatgttccggggaggctccttatgg
agaccccccatcctaaacaactactctcacagaggtgaagataaggctgaggtggaggag
gacgccccccctgaggaggaggtgaagaaagggcagctcagatctgagcacagacagaga
ctggagacaatccttacagagctcacgccgagcagagaagatattgccaacgccatgctg
ttctgtctggagcgagcggatgctgcagaggaagtcgtgggaaacatcactgaatctttt
tccttgcttcagacgcctcttcagaagaagattgccagattgtatctcgtgtcagacatc
ttgcacaactcgtgtgccaaagtagccggtgcatcatattatcgtaaatattttgaaccc
aagctcacacagatatttgaaggccttaacgcggcacacaaaaacatacaagccaggctg
caggctgagcagtttaagcaaaaggtcatgagttgttttcgagcatgggaagactgggcc
atctacccggagccttatctcatccaccttcagaacgtctttctgggctacgccaaagct
gtggaggagccgaccgagacggcagaggtagtgtcatttgatctcgacggtgcgccgatg
gacagcacacctatagacgggttacctttggacagagctcctgaagatgacctggacggc
tgccccatgggctgggggcccctggatggagtctctgctgatgacatagacggtgttccc
ttaggagtcgccgttgatgacattgacggaatgcccttagatgagagcaacgttcgtctc
tctggagtgcctttgtctaagtgggagacaacaggtgatgttgggacattttctcaagcc
aagactgagtcgaagtggaacatggtggtgcagcaggacagtgaagatgaagtgaacgca
agcgtcaaatcacaggacgggggcgaggactcagagagcgacagtagcgatgactcctgc
agttcgtccaaatttgaaagtgcggacttccagagctcgctcagaagttttcagatgtct
gagagcaaaaggaaaaggttgagagagctggaggtaaaggttatgaagatccaggatgaa
ctggaatctggcaagaggtcgaggaagactggaatgagcctccaacaacaagtggagcac
tacaggaacaaactgctacagaaggagtttgaaaaagatgacaagaatgagacactgaca
tcaaaatctaaagacaagtcaaaggatgacagaagggagaaagagaggagcagaagaaac
gatgacggggacagaaggcgacagcggagtagagatcctgatgaccacacccggaaatcg
agaagcatctctcccttgaagacaaggtctccgaagtggtccaaacgttcccgatcccct
tcaccaaaccggaaagcgggcaagtccaggtcacggtcgccgcatcgctcccacaagaag
gcgaagaagagcaaacattga
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