Acanthopagrus latus (yellowfin seabream): 119031406
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Entry
119031406 CDS
T08233
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alat03009
]
119031406 (ddx52)
Enzymes [BR:
alat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119031406 (ddx52)
Ribosome biogenesis [BR:
alat03009
]
Eukaryotic type
90S particles
Helicases
119031406 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
119031406
NCBI-ProteinID:
XP_036975743
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All DBs
Position
13:complement(9680445..9685577)
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AA seq
691 aa
AA seq
DB search
MDAFDLFRKLGAGAKFDLKRFGQDAARFKVVRSQGSDASSDPLSAIDFFGTGSTNGSQSS
SKVTEEEDGDGEEYEEGGESEDSGAGGKRKHKDEEGDAKRKKKKTKRKQMEVEAGSGLLK
DTEGSGITWTSSLDRKIQSLPGDGKEKSSLKRLKHLHQEKVNRIRSQHRINVHGSDIPDP
VCTFEELQSEYRLNPRVIQNLRDAGLNSPTPVQMQAIPLMMHGRELLACAPTGSGKTLAF
CLPLLAHLQQPANLGFRAVIISPTRELASQTYRELLRLSEGVGFRVHIIDKASLAAKKYG
PQSSKKYDILVSTPNRLIFLLNQDPPALDLSSVEWLVVDESDKLFEGGKTGFREQLATVF
LACSGSKVRRAFFSATCTSDVEQWCRLNLDNLVSVNIGHRNTAVETVEQELLFVGTENGK
LVAMRDIIKKGFLPPMLVFVQSIDRARELFHELVYEGINVDVIHADRTQQQRDNVVNSFR
SGKIWVLICTALLARGIDFKGVNLVLNYDFPTSSVEYIHRIGRTGRAGHQGKAITFFTEN
DKPLLRSIANVIKQAGCPVPDYMIGFKKIHSKVKRRLEKRPPKRSTICTTPRFLMKKKGN
APNRGQKGEKQAASGEQNGSEKAVKQQKGEKSTKGQGLKKRSKSQKGGGTEKHKKASQKT
GANSSGAKFKKKKGEEKQATRGIESGASRMI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcgacttgtttcggaaactcggagctggagctaaatttgacttaaagagg
tttggtcaggacgccgctcggtttaaggttgtcaggtctcagggatctgacgcgtcctca
gatcccctatctgcgatcgatttctttggcacaggatcaaccaatggatcccagagcagc
tctaaagtaaccgaggaggaggatggtgatggagaggagtatgaggaggggggtgaaagt
gaagactctggtgcaggaggcaaaaggaagcacaaggatgaggagggagatgcgaagagg
aaaaagaaaaagaccaaaagaaaacagatggaggtggaagctggtagcggactactgaaa
gacacagagggaagcggcatcacatggacgtcctcgttggacagaaagatccagagcctg
cctggggacgggaaggagaaatcctctctgaagaggctgaagcatcttcatcaagaaaag
gtgaatcgcattcgttctcaacaccggataaacgtgcacggctccgacatacccgacccc
gtgtgcacatttgaggagctgcagtctgagtatcgcctcaacccgcgtgtcatccagaac
ctcagagacgctgggctgaactccccgacgccagtgcagatgcaggcgataccgctcatg
atgcatggtcgggagctgctggcctgtgcacccacaggatcggggaagactttggctttc
tgcctcccgctgctcgcccacctgcagcagccggccaaccttggcttcagagcggtgatc
atctccccgaccagagagctggccagccagacctacagagagctgctccggctgtcagag
ggagtaggatttagagttcacatcatcgacaaagcctccctggcagccaagaaatacgga
ccgcagtcgagcaaaaaatatgacatacttgtcagtacaccaaacagactcatcttcctc
ctcaatcaggatcctccagctctcgacctcagcagtgtggagtggctggtcgtcgatgag
tccgacaagctgttcgagggcggtaagacgggcttcagggagcagctcgccacagttttt
ctggcctgctccggttcaaaggtgcgcagggctttcttcagtgccacctgcacgtcggat
gtcgagcagtggtgccgcctgaaccttgacaacctggtgtctgtcaacatcggacacaga
aatacagcggtggagacagtggagcaggagctgctgtttgttgggacggagaacggaaaa
ctggtggccatgagggacatcatcaaaaaaggattcctgccccccatgctggtgtttgtg
cagtctatagatcgagcgcgggagcttttccatgagctggtgtatgaaggcatcaatgta
gacgtgatccacgcggaccgcacacagcagcagagggacaacgtggtcaacagttttcgc
tctggtaagatttgggtattgatctgcacggctctgctcgccagaggaatcgacttcaaa
ggggtcaacctcgtgctgaactacgacttcccaaccagctccgtggagtacatccaccga
atcggtcgcactggcagagctggacatcaggggaaggccatcaccttcttcacagaaaat
gacaaaccactgctgcgcagcatcgccaatgtcattaaacaagctggctgtcctgtaccc
gactacatgattggcttcaagaagatacacagcaaagtgaagcggaggcttgagaagaga
cctcccaaacgaagcaccatttgcacaactcctcgcttcttaatgaagaagaaaggaaac
gcaccaaacagaggacagaaaggagagaagcaggcagcgagtggagagcagaatggatcg
gaaaaagcagtgaagcagcagaaaggagagaagagcacaaaaggacaggggctgaagaaa
agaagtaaatcacaaaaaggaggaggaacagaaaaacacaagaaggcgtctcagaagaca
ggagcaaattcctctggagccaagttcaaaaagaaaaaaggtgaagaaaaacaagccaca
agaggaatagagagcggtgcaagcagaatgatatga
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