Acanthopagrus latus (yellowfin seabream): 119031546
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Entry
119031546 CDS
T08233
Name
(RefSeq) high mobility group-T protein-like
KO
K10802
high mobility group protein B1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03410
Base excision repair
alat04140
Autophagy - animal
alat04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119031546
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119031546
09143 Cell growth and death
04217 Necroptosis
119031546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119031546
03400 DNA repair and recombination proteins [BR:
alat03400
]
119031546
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119031546
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
119031546
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119031546
MMR (mismatch excision repair)
Other MMR factors
119031546
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119031546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
NOA36
ANAPC15
Motif
Other DBs
NCBI-GeneID:
119031546
NCBI-ProteinID:
XP_036976000
LinkDB
All DBs
Position
13:12090009..12094004
Genome browser
AA seq
206 aa
AA seq
DB search
MGREAGKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFE
DLAKQDKVRYEREMMSYVPARGGKKKKFKDPNAPKRPPSAFFIFCSEFRPKVKGEAPGLS
IGEVAKRLGEMWNGTASEDKQPFEKKAAKLKEKYEKEVAAYRQKTKGGAAPAGKAPAKVE
KKADDDDDDDDDDDEEEDDYDDDDDE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggggagagaagcaggaaagccaaggggcaagatgtcctcctatgcctattttgtccag
acttgccgggaggagcacaagaagaaacaccctgatgcttcggtgaacttcgccgagttc
tccaagaagtgctctgagcgatggaagacaatgtctcccaaggagaagggcaagttcgag
gacttggccaagcaggacaaggtccgctatgagagggagatgatgagctacgttcctgcc
aggggaggcaagaagaagaagttcaaggaccccaatgcccccaagagacccccatctgcc
ttcttcatcttttgctcagagtttcgccctaaggtgaaaggggaggcccctggtctgagc
attggagaggttgccaagaggcttggtgagatgtggaacggcaccgcttcagaggataag
cagccatttgagaagaaggccgctaaactgaaggagaagtatgagaaggaagttgcagca
tatcgccaaaagaccaaaggaggcgccgcaccagcaggaaaagccccggctaaggtagag
aagaaggcagatgacgatgatgacgacgatgacgatgatgatgaggaggaggacgactat
gatgatgatgatgacgagtag
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integrated database retrieval system
