Acanthopagrus latus (yellowfin seabream): 119031580
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Entry
119031580 CDS
T08233
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119031580 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119031580 (chrne)
Ion channels [BR:
alat04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
119031580 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SLATT_5
Motif
Other DBs
NCBI-GeneID:
119031580
NCBI-ProteinID:
XP_036976044
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Position
13:7214040..7222111
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AA seq
525 aa
AA seq
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MSRSLETTSLLLWSSCCCHPFLHNGDIDDYSQCNEEKHLIKDLFTGYNKNIRPVVHPEDK
VEVQIKLTLTNLISLNEKEETLTTNVWIEIQWADYRLAWNASDYYGIELIRVPCNTVWLP
DIVLENNIDGKFDVAYYANVLISNTGWMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRS
QTYSANEVDLILAVGETAETIEWVDIDPEAFTENGEWAIVHRPARKMINKRYSPDDLEYQ
EILFNLVIQRKPLFYVINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLF
LIAQKIPETSLSVPLIGKYLIFVMSVTTLIATNQIVVLNFSLRSPSTHTMSYSIKHLFLE
MVPRFLGMSPLVEEGEETAEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHG
LTRSVVDNIDVSSTANLYKSLAQAAPEIKQCVDACNFIAESTRQQNDIGSEIESWVLIGK
MIDKVCFWAAILLFIIGTVGIFLTGHFNQAPELPFPGENKRYVPS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgatcattggagacgacatctttactgctgtggagttcatgctgctgtcaccct
tttttgcataatggcgatattgatgattattcgcagtgtaatgaggagaaacacctgatc
aaagacttgttcacaggctacaacaagaatattcgcccggtggttcatcctgaagacaag
gtggaggttcagatcaagctgaccctcactaacctcatctctctgaatgaaaaggaagag
acgcttacgaccaatgtgtggattgagattcaatgggccgattatcgtcttgcctggaac
gcatctgattattatggaattgagcttattcgtgtcccatgcaacactgtttggcttcct
gacattgtccttgagaacaacattgatggcaagtttgatgtggcttactatgccaatgtg
ttgataagcaacactggttggatgtactggctgccacctgctatctatcgcagcacatgt
gccatagagatcacctacttcccattcgattatcagaactgcacactagctttcagatcc
cagacgtacagtgccaatgaggttgacctcatcttggctgttggagagacagcagagact
attgagtgggtggacatcgatccggaggctttcacagagaacggtgagtgggccatcgtc
catcgtccagccaggaagatgatcaacaaacggtattccccagatgacctagagtaccag
gagatcctgttcaacctggtcatccaaaggaagcccctcttctacgtcatcaacatcatc
ctgccctgctccctcatctcttcgctggtcgttctggcctactttctacctgcacaagct
gggggacaaaagctgactgtgtccatctctgtcttgctggctcagactgtcttcctcttt
cttattgctcagaagatccctgagacgtcactctctgttcctctcattggcaagtacctg
atctttgtcatgagtgtcactaccctcattgccaccaatcaaattgtggtgctgaacttc
tccctgcgcagcccaagcactcacaccatgtcctacagcatcaaacatttgttcctggaa
atggtgcctcgcttcctgggcatgtcccctctggtggaagagggtgaggagacagcagag
gtaaacggagtgagggagcggcggcgcagctcctttggcctcatgcagagagcagaggaa
tatgtgctgaaacaacctcgcagtgagatgatgtttgacaagcagagagagaggcatggt
ctcaccagatcagttgtggataacatcgatgtcagcagcacagccaacttgtacaagagt
ttggcccaagctgcacctgagatcaagcaatgtgtagatgcctgcaacttcattgccgag
agtacaagacaacaaaatgacattggatctgaaattgaaagctgggtcctgatcgggaag
atgattgacaaggtttgcttctgggctgccattctcctcttcatcattggcacagtgggg
atcttcttaacgggacacttcaaccaggcgcctgagctaccatttcctggggagaacaaa
agatatgtccctagttaa
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