Acanthopagrus latus (yellowfin seabream): 119031840
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Entry
119031840 CDS
T08233
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04080
Neuroactive ligand-receptor interaction
alat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119031840 (gabra1)
04082 Neuroactive ligand signaling
119031840 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119031840 (gabra1)
Ion channels [BR:
alat04040
]
Ligand-gated channels
GABA-A
119031840 (gabra1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
119031840
NCBI-ProteinID:
XP_036976476
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Position
13:779264..812012
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AA seq
492 aa
AA seq
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MWSMLCCLVVSSSSSRYRSRHGSVKGPHIATMRGRSRTVFVCLWTYALVTITVLGGKSSG
QNGLTDDKQDNTTVFTKILDSLLDGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEY
TIDVFFRQSWKDERLKFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLR
ITEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVV
VAEDGSRLNQYDLMGQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVIL
SQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSA
LIEFATVNYFTKRGYAWDGKSVVPEKQKKKKESLLKKNNTTAYPAATATAFAPNIARDPG
LATIAKSAPPPPTEPKEEPKPKPPEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYL
NKKPKLQGMNPH
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgatgctgtgctgccttgttgtttcttcttcatcatcgcgctacagaagcaga
catggctcagtgaaaggtcctcatattgcaactatgcgtggacggagcaggacggtcttt
gtgtgcctgtggacttatgctctcgttaccatcaccgtgttgggtggaaaaagctccggg
cagaatggcttgacagatgataagcaagataacacaacagtgttcaccaagatcttagac
agccttctggacggctatgacaatcgcctccggccaggactgggagagcgtgtaaccgaa
gtcaagactgacattttcgtgaccagtatcgggccagtttcggaccacgacatggagtac
accatcgatgtcttcttcagacaaagctggaaggatgaacggttaaagttcaaaggcccc
atggccgtgctgcgtctcaacaacctgatggccagcaagatctggacccccgacaccttc
ttccacaacggcaagaagtcggtggcccacaacatgaccatgcccaacaagctgctgcga
attacagaggagggcacgctgctgtacaccatgaggctgacagtaagagcagaatgtccc
atgcacctggaagacttcccgatggatgctcatgcctgtccactgaagtttggcagctat
gcctacactcgagcagaggtggtgtacgtgtggaccagaggggctgcccagtccgtggtg
gtggcagaggacggatccagattaaaccagtacgatttgatgggacagagtgtggattct
ggtgtggtccagtccagtacaggagagtacgtcgtgatgacaacccacttccacctgaag
aggaaaattggttactttgtgatccagacgtatctgccctgcatcatgacagtcatcctg
tcccaagtgtctttctggctcaacagagaatccgtccctgccaggactgtctttggagtg
accactgtcctgaccatgaccacactcagtatcagcgccaggaactctctccctaaagtg
gcctacgccacagctatggactggttcattgccgtctgctacgccttcgtcttctcggct
ctcattgagtttgccaccgtcaactacttcaccaagaggggctacgcctgggacgggaaa
agtgtggtgccagagaagcaaaagaagaagaaggagtccctcctcaagaagaacaacacc
acagcctacccagctgccactgctacagccttcgctccaaatattgccagggaccctgga
ttggccacgattgcaaaaagcgccccaccacccccaactgagcccaaggaggagccaaag
cccaaacctccagaggccaagaagacctttaacagtgtgagcaagatagacaggattgcc
agaatagccttccctctgctctttggaacctttaacttggtctactgggcgacctacttg
aataagaagcccaaattgcaggggatgaatccacactaa
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