Acanthopagrus latus (yellowfin seabream): 119031954
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Entry
119031954 CDS
T08233
Symbol
npas2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119031954 (npas2)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119031954 (npas2)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
119031954
NCBI-ProteinID:
XP_036976689
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Position
13:complement(6322952..6369117)
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AA seq
894 aa
AA seq
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MDNLSDFGGPCPSSRREWDTNSCVDDLMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTIDFLQKQKDITAQNETCDVRQDWKPSFLSNEEFTQLMLE
ALDGFLVALTTDGNIIYVSDSVSSLIGHLPSDMVDQNILNFLPEREHGEVYKLLSSHMLM
TDPIAADFLDSEAHIEFCCHLARGNIDPKEPPIYEYVKFVGDFKFHNNVPTSSCNGLELT
LPRSLQSTLEEQVCLIATVRLVTPQFLKDLCNVEDPCDEFTSRHSLEWKFLFLDHRASPI
IGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGKSCYYRFLTKGQQWIWLQTHYY
ITYHQWNSKPEFIVCTHTVVSYAEVRAERRRAFGFEELSPPEIAPSSVKAQELYLDICST
LDPPRDRNSGARSVSSHSSRKSSHTALSDSASANSYTEACTPSWQSASIGTEKTSARLQP
SSSKNLAQRQNSFDLVPQMSLPLSPTCSKHSAMQQQTQQQQQQQQQQPQSQSSMYELQQP
QICVMNQLKEQLEERTRILQADIKTQQQELHDIKEKLHFANLQMLLQQPIHNDFGQAQQQ
QQQQQQQQQQQQQQRGRPAQQSQSGVIRQLAGHPKQPSCGAHSSSPHSLLRESSSPSSQV
QQRIARSGQSAVSVPVQTNTSLTMPFYSNPMMFSQTNSRSLQDANQRHTDGEFNQDGQLR
MLLNQPMQTLVPTSSVTTQPSQCNMGISQTIYTLEQQIIAPPFSMQQVNCNAVLVPSPVF
TSPIMIPHNTFITNQSQSTYHAQPQASQHSLQLQQPQQFFQMTQGLVQGGSTPTFLHTAN
VPQQGTVGYIQQQTQQVPQAQQQQQQQQQQQQRQYQHSQNQTSNVSDFRNMLTR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctttctgacttcggtggcccctgtccatcctcccgcagggaatgggacacc
aacagctgcgtggacgatttgatggacgaagatgaaaaagacagggcaaaaagggcatct
cgtaacaaatcggagaaaaaaagaagagaccaattcaatgtgctcatcaaggagctatgc
accatgctgcagggtcagggccacccgcgcaagatggacaagtccaccatattgcagaga
actatagacttcttgcagaaacagaaagacatcacagcgcagaatgaaacatgcgatgtg
aggcaggactggaagccatcgttcctcagtaatgaggagttcactcagctaatgctggag
gccctggatggtttcttggttgcgttaactacggatggcaacatcatatacgtatctgac
agcgtgtcttcacttattggccatttaccgtcagatatggtggaccaaaatatcttgaat
ttcctcccggagcgggaacacggggaggtgtataagctgctatcatcccacatgctgatg
actgaccccattgctgctgacttccttgacagtgaggcacatattgaattttgctgtcat
ctagccagaggtaacatcgatccaaaggagccgcccatatacgagtatgtcaagtttgtc
ggagatttcaagtttcataacaatgtgcctacatcttcttgtaacgggctcgagttgacg
ttaccaagaagcctgcagtcgacgctggaggagcaggtctgcctcatcgctactgtacga
ttagtcactccacagtttttaaaggatttgtgtaatgtggaagatccttgtgatgaattc
acatccagacacagccttgaatggaagttcctgtttttagatcacagagcttcgccgatc
atcggctacctacccttcgaggttcttgggacttcaggctacgattactatcatgtggat
gacttggagcttatagctcagtgtcataagcagttaatgcagtttggaaagggtaaatcc
tgctactatcgcttcctgaccaaaggtcagcagtggatttggttgcagactcactactac
atcacttaccatcagtggaactccaaacctgagttcattgtctgcactcacactgttgtc
agttatgctgaagtgcgagctgaaaggaggcgagcgtttggctttgaagagctgtctccg
ccagagatagctccctcttcagtgaaggcccaggagctgtacttggatatctgctccaca
ctggaccctccacgggacagaaacagcggtgcacgttcggtgtcctcccacagctcccgg
aagtcctcccacacagctctgtcggactctgcatcagctaactcctacacagaggcctgc
acaccatcatggcagtctgcttccatcgggacagagaagacatctgccaggctccaacct
agtagttcaaagaatttggcacaaagacaaaattcctttgacctcgttccccaaatgagc
ctccccctttctcctacctgcagcaagcactccgcaatgcaacagcagacacagcagcag
cagcagcagcagcagcagcagccgcagtcgcagtcgtccatgtatgagctgcaacagcct
cagatctgtgtaatgaaccagctgaaggaacagctggaggagaggacgcgcattctgcaa
gctgacattaagacgcagcagcaggagctgcacgacattaaggagaagcttcacttcgct
aatctccagatgttgttacagcagcctatccacaatgactttggccaggcccagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagagggggagaccggcccag
cagagccagtcgggggtgatcaggcaactcgcaggccatcccaaacaaccgtcctgtggg
gcccacagctcatcccctcactccctgctgagagagagcagctcaccctcgtcacaggtc
cagcagagaattgcgcggagcgggcagtcggcagtgagtgtgcccgtgcagacgaacacg
agtctgaccatgcccttctacagcaaccccatgatgttctcccagaccaactcgaggtct
ctacaggacgcaaaccaaagacacacggacggcgagttcaaccaggacggtcaactacgc
atgctcctcaaccagccaatgcagacgctggttcccactagcagtgtcaccacgcagcct
tcccagtgcaacatgggcatctctcaaaccatatacacgttggagcagcagatcatcgcc
cctccgttctccatgcagcaggtcaactgcaacgccgtcctcgtgccctccccggtcttc
acgtctcccatcatgatcccacacaacactttcatcacaaaccagtcccagtcgacctac
cacgctcagcctcaggcttctcagcactccctgcagctccagcagccgcagcagttcttt
cagatgactcaaggactcgtacaaggtggatctactccaacattcttacacaccgctaat
gtcccgcagcaaggcactgtgggatacatccagcagcaaacacagcaagtgccgcaagca
cagcagcagcagcagcagcagcagcagcagcaacagaggcaataccaacattcccaaaac
cagactagcaatgtttcagacttccgaaatatgttgactcggtag
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