Acanthopagrus latus (yellowfin seabream): 119032112
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Entry
119032112 CDS
T08233
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
alat01001
]
119032112 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119032112 (trim24)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119032112 (trim24)
Protein kinases [BR:
alat01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
119032112 (trim24)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119032112 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
PML_CC
PHD-1st_NSD
zf-C3HC4
DUF5054
FemAB_like
ParB
DUF1351
DUF7615
Motif
Other DBs
NCBI-GeneID:
119032112
NCBI-ProteinID:
XP_036976804
LinkDB
All DBs
Position
14:9041194..9051166
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AA seq
1084 aa
AA seq
DB search
MDESAENVDNDDIVIIVENEAESLPAEEERLKQQGTFGLMDTCPICKLSFHNREPKLLPC
LHSFCKRCLPAPFRSADPRRDSQGQIDSNKPLGAIRCPVCRQECWEMDVLDNFFVKDSAE
VPSSTVEKTSQVCMSCEDNTEATGYCVECVEFLCVTCIEAHQRVKFTRDHTIRQKEEMSP
EAVGMSTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHRQYL
ENMTQQLQEKRKAIEDVSTCISTGLQQVDENRKSVTNEIKKSICNLIMEINRKGKILVNQ
LEALTKDHELGLKKQQEDVNSLSRHLDHVISFTKWATASHSGTALLYCKRLILYQIHYLM
RASCNPSIVPQSSVRFQCRSGFWATNVDLGSLVVERGPARPPITNHQAGPRAEAPTGALT
AAQQRQSTLAQLQMQVGFSPQPVALVDKLSQQPHRQPPPNHWSWYQNVRLPGPPGPPPPT
RPIHGGSSPSQGPPNMGQQGRRFVNSHPNPRSPTSSMLHNTGFTPAQSLRDLIQSSTYPP
KPMDVLQGTSRYTQPMSTGAATQTSLHQRGLTESTYLKRSEAVGPVPSITISIPKPSFAT
SGTSATVDKTSALNHVTAQARQNSPLAKPSSSDRSTGTTSWKPTFEPPSAPPTKRRRRTS
PGPIIVIKDEPEDEDEVRFVQSSLPDSSTGAQSKPRQQLKAVVPAAVPVSESKAGKEQRP
QPAGEPETEKRAEPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLACHIPTLNESPSGEWF
CSFCRDLISPEMKYDCQRNDDPASEGFPPVDRRRCERLLLRLFCNDFSTDFQQPATPSET
RRYKELIKTPMDLSIVKRRLESKLGEAECYSCPEGFVADIRLIFINCAKYYKASSEVGSA
GLYLEDYFEEQLKLVYSDKVFPGGREEQMIPPLEDEIDEEEEEMTAEGIAPLEDDKQQSP
VGEGIPPVEEDLAPLEEAAALAEEEKPETEEEAIDTSDKGTDKKVAAKEEVTAPAEEAEQ
QEKSPEQEVKSSAASVESETKDGEASSSPKEENPQLSMDKTEDPAETQKKESAPADTAKE
EEEG
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagtgccgaaaatgttgacaacgacgacattgtcattatcgtggaaaacgag
gcggaaagtttgccagccgaggaggagaggctgaaacagcaaggcaccttcgggctcatg
gacacctgtcctatctgcaagttgagcttccacaacagagagcccaaactgctgccgtgt
ctccactccttctgcaagaggtgcctccctgctcccttcaggagtgctgacccgcggcgt
gactcgcagggtcagatcgacagcaacaaaccattgggtgccatacgatgtccagtatgc
agacaggaatgctgggagatggacgtgttggataacttctttgtgaaggactctgccgag
gtgccaagtagcacggtggagaaaaccagccaggtgtgtatgagctgcgaggacaacaca
gaggcaacaggttactgcgtggagtgtgtggagtttctgtgtgtgacgtgtatcgaggca
caccaaagggtcaagttcaccagggatcacaccatacgccagaaggaggagatgtctcca
gaagcagtaggtatgtccacacagaagcctgtgttctgcgacatccacaagcaggaacct
ctgaagctgttttgtgagacgtgtgaccgactcacctgtcgggactgtcagctgcttaag
cacaaagatcacaactaccagttcttggaggatgcatacaggaaccacaggcagtatctg
gagaacatgacacagcagttgcaagagaaaagaaaggccattgaggatgtgtccacctgt
atcagcaccggactccagcaagttgacgaaaaccggaagtctgttactaatgaaataaaa
aagtccatctgtaatttgattatggagatcaataggaagggaaagattctggtcaaccag
ctcgaggctctgactaaggaccatgagttgggtttgaagaagcagcaagaggacgtcaac
tctctgagcaggcacctggaccacgttatcagctttaccaaatgggctacagccagccac
agtgggacagcgctcctgtactgcaagagactaatcctttatcagatccactacctgatg
agagcgagctgtaatccttcaattgtccctcagagttctgtgcggttccagtgtcgctct
ggtttctgggccaccaatgtagacctcggctctctggtagtagaaaggggccctgcccgt
ccgcccatcaccaaccaccaggcaggtcccagagcagaggcacccactggagctctcaca
gcagctcagcagagacagagcacgctggctcagctccagatgcaggttgggttttcacca
cagccagtagctttggtggacaagctttcccagcagccccacaggcagccccctcctaac
cactggtcctggtatcaaaacgtcaggctcccaggacctcccggccccccgcccccaacc
agacccatccacggtgggtcctccccctcccaaggccccccaaacatgggacaacaggga
cgcagattcgtgaactcccaccccaaccccagaagccccacatcatccatgctgcacaac
acaggattcacacctgctcagtctctgagagatctgatccaaagctcgacctaccctcct
aaacccatggatgtcttgcagggtacgtcccgctacacgcagcctatgtccactggagca
gctacacagacgtcactacatcagcggggcctgacggagtccacctatctgaagaggagt
gaagctgttggacccgtcccctccattaccatctccatccctaaacccagctttgctaca
agtggaacttcagcaactgtggacaagacgagcgcgcttaatcacgtaacagctcaagcg
aggcagaactccccgttagccaagccgtcttcttcagacagaagcacggggacgacttcc
tggaagccgacttttgaacccccgtctgcccccccaaccaagcgacgaagaaggacgtcc
cccgggcccattatagtcatcaaggacgaaccagaggacgaggatgaagttcgttttgtg
cagtccagcctgccagacagcagcaccggggctcagtcaaagcctcggcagcagcttaag
gcggttgtcccagcagcagtccctgtatctgagtccaaagctgggaaagaacagcgtcct
caacccgcaggggagccggagactgagaagagagcagagccggaggaagatcccaacgag
gactggtgcgccgtctgtcagaacggaggggagctactctgttgtgacaagtgccccaaa
gttttccatctggcctgtcacatccccactcttaatgagtcccccagtggcgagtggttc
tgttcgttctgccgtgacctcatctctcctgaaatgaagtacgactgccagaggaatgat
gaccctgcctctgaggggttcccacctgttgatcgaaggaggtgtgagcggctgctacta
cgtctgttctgcaatgacttcagcactgacttccagcagcctgctactccatcagagaca
agaagatacaaagagctgatcaagacgccaatggatttgtcaatagtgaagaggaggctt
gagtcaaagttgggggaagctgagtgctacagttgtccggaggggtttgtcgcagacatc
aggctcatttttatcaactgtgcaaagtactacaaggcgtcctcagaagtgggcagtgca
ggcttgtacttggaggactactttgaggagcagcttaagctagtctactcagataaagtc
ttccctggtgggagggaagagcagatgatccctccgttggaggatgagatagatgaagaa
gaggaagagatgacggcggaaggaattgccccccttgaggacgataaacagcaaagtcct
gtgggagaaggaatcccacctgtagaagaggacttggctcctctggaagaagctgcagca
ctggcagaggaagagaagccagaaacagaggaggaggcgatcgatacaagcgataaggga
acggacaaaaaggttgcagccaaggaggaagtcacagctcctgcagaggaggcagagcag
caagagaaaagtcctgagcaggaggtgaaaagctctgctgcttctgttgaaagtgaaaca
aaagatggagaagcttccagctccccaaaagaggagaaccctcaactctctatggacaag
actgaagatcctgctgaaacccagaagaaggagtcagctcctgcagacacagccaaagag
gaggaggagggatag
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