Acanthopagrus latus (yellowfin seabream): 119032166
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Entry
119032166 CDS
T08233
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b isoform X1
KO
K05636
laminin, beta 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119032166 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119032166 (lamb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
LAMB1
DUF3887
Motif
Other DBs
NCBI-GeneID:
119032166
NCBI-ProteinID:
XP_036976941
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All DBs
Position
14:complement(18429574..18452029)
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AA seq
1777 aa
AA seq
DB search
MSLIIHLLTALALCCPVRAQFPEFADVCTEGSCYPATGDLLIGRAHKLTASSTCGVKKPE
RFCIVGHLEEEKKCFVCDSSKMYDEDNNHVSHTIENVVTTFAHNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKTWQVYRYFAYDCESSFPGVSSGPL
AKVDEVICDTRYSDIEPSTEGEVIFRVLDPAFEIEDPYSLRIQNMLKITNIRTKFIKLHT
LGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAPIDGAPTGAEGMVHGRCVCNH
NTEGLNCERCRDFHHDLPWRPAEGRNTNACKKCECNHHSTSCHFDLAVYMTTGNMSGGVC
EDCQHNTVGRQCEHCAPFYFQHPNRDLRDPNVCEQCNCDPDGSLQGGLCDARTDVQAGLI
SGQCRCKVNVEGERCDTCRQGHFGLGQGPGGCLPCTCNPLGTLPGGNPCNSETGSCFCKR
LVDGHNCDQCLPQHWGLSNDMDGCRPCDCDQGGAVNNNCDPHSGQCECREHMFGRRCDQV
ESGFYFIALDHYTYEAEDAKHGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFSINN
IPESMDYDILIRYEPQLPQQWEQVNVRVQRPVFNPPNYSGHCSNSIQSGDDQSISLPPGS
RHMLLVRPICFEQGLNYTVRLSLPLYSSISAVQSPYTLIDSLVLIPRVRELDMFHGIDGE
GAWDTFQRYRCLESSQSVVKSPMTDICNDYIFSVSALLHKGAMACQCDPQGSLSALCDPS
GGQCRCRPNVMGRNCDHCAPATFLFSPAGCRPCECDLRGSVTAMCHEATGQCECVSGATG
RQCSHCLPGFWGFPQCRPCNCNGHSEYCHPQTGECQGCRDFTTGHHCERCLDGYHGDPEL
GSGDHCRACMCPDGPRSGRQFSDSCYLLGNQLVCVCSSGYKGARCDQCAPGYFGNPLVPG
GRCLPCQCNNNIDMHDPGSCDARTGACVKCLHHTEGYACQHCKLGYYGNAGTQSCRKCMC
YPMGTAPQACSSPHDCQCDQLSGQCPCQPNVVGQNCDRCAADTWNIASGTGCQRCDCDPD
HSYGSSCNEVTGQCSCKPGFGGKTCRECRELFWGDPKVKCQACDCDARGISSNQCHRATG
QCTCVKGVSGLKCDQCARGYQGEFPSCEPCHQCFAVWDNVVGELTNQTKRLEAQVTELQS
SGVTAPYKELVSSLERNAKAVREIVESNPAAVKLEQIQDLMHEITGLMSYLNGKLNTSEE
TLDLLHGDANATDANLDALTDEADRLEQSVKELRQQVYDAKNANIQGAMDTITDAHRQSM
MAELRANASTSDPGNTVERSAAVRKATEDKLSSGQKEFDRKHQRNQKKLDKLSNELKQLD
LVSLSEKTCGGAAEGDSCSDSSCGGLGCRGDGAPQCGGEGCGGLVITSEKALKSAKDLDQ
EILTAMQEVDKLSRMVWEANNRANAAKVNAMEVLIKSNQSKERVEQSNDQLRNLIKEIRD
LLTNEKADVSVIEAVANEVLTLEMPTSTEKLQELTKEIREKVGTLTSVESILSQSADDIQ
AAEALLKQAKAASEQASNMKDTAEVVKAALDESERAQNVAMDAIQLAQNNTKGTLDLLIT
VESETAMSELKLSNTTGRLVQLEREVGLLRQNNLEVNRLAERVDWITEQAKQNADEAQQE
FDVEVKDKFEEAEDLVGDKGESVLQARRKADELQQEAKELLAQSSAKLQRLSELERAYES
NQRVLEARAAELAELERKVRGILDEISQKVTLYSTCL
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcatcatccaccttttaacagctttggccctgtgctgtcctgtcagggctcag
tttccagagtttgcagatgtttgcacggagggcagctgttatcccgccacaggtgacctg
ctgatcggccgggcacacaaactcaccgcctcctccacctgcggcgtgaagaagccggag
cgcttctgcatcgtcggacacctggaggaggagaagaaatgtttcgtgtgcgactccagc
aagatgtacgacgaggacaacaaccacgtcagccacaccatcgagaacgtggtcacgacc
ttcgcccacaaccgcctgaagacctggtggcagtccgagaacggtgtggagaacgtgacg
atccagctggacctggaggccgagtttcacttcacacaccttatcatgaccttcaagacg
tttcggccggctgccatggtgatcgagcgctcgatggatttcgggaagacgtggcaggtt
tatcgttacttcgcctacgactgtgagtcgtctttccccggcgtgtcgtccgggccgctg
gccaaagtggacgaagtcatctgtgacacccgttactcagacatcgaaccgtccaccgag
ggagaggtgatatttcgggtgctggatcccgccttcgagattgaggatccctacagcctg
aggattcagaacatgctgaagatcacgaacatccgcacaaagttcatcaagctccacaca
ctgggcgacaacctgctcgactcccgcgacgaggtgacggagaagtactactacgccctc
tatgacatggtcgtccgcggcaactgcttctgttacggccacgcctccgagtgcgccccg
atcgatggagcgccgaccggagccgagggcatggtccacggacgttgtgtgtgtaaccac
aacacagagggactgaactgtgagcgctgcagggacttccaccatgatctgccgtggaga
cctgccgagggacgaaacaccaacgcctgcaagaagtgtgagtgcaaccatcactccacc
tcgtgtcacttcgacctcgccgtgtacatgacgaccggcaacatgagcggaggcgtgtgc
gaggactgtcaacacaacacggtgggccggcagtgcgagcactgcgcgccgttctacttc
cagcacccgaaccgagacctgcgagacccaaacgtctgcgagcagtgtaactgtgaccca
gacgggtcgctgcagggcggactgtgtgacgctcggaccgacgtgcaggccgggctgatc
tcaggtcagtgtcgctgcaaagtcaacgtggagggcgagcgctgtgacacctgcagacag
ggacacttcgggctgggacaagggcccggcggctgcttaccttgcacctgcaacccgctg
ggaactctgccgggaggaaacccctgcaactcagagacaggaagttgcttctgcaagcgc
ctcgttgacggacacaactgcgatcagtgtctgccgcagcactggggtctgtccaatgac
atggacggctgcagaccatgtgactgcgaccagggcggagctgtcaacaacaactgcgac
cctcactctggacagtgtgagtgcagggagcacatgttcgggcggcgctgcgatcaggtg
gagtccggcttctacttcatcgctctggatcactacacctacgaggcggaggacgccaag
cacggacctggtgtgactgttgtaccgaggccttaccctctggatcgcagtcctacgtgg
accggtatgggctttgttaacgtgccggaaggagcctacttagagttctccatcaacaac
atccctgaatccatggactacgacatccttatccgctatgagccgcagcttccgcagcag
tgggagcaggtgaacgtccgagtgcagcgtcccgtcttcaaccctccaaactactccggt
cactgcagcaactccatccagagtggagacgaccagtccatctctctcccacctggatcc
agacacatgttgctggtgaggccgatctgtttcgagcaaggactgaactacacggtccga
ctcagccttcctctctactcgtccatcagcgccgtccagagcccgtacacgctcatcgac
tctctggtgttaataccgcgggtcagggagctggacatgttccatgggatcgacggcgag
ggagcgtgggatacgttccagcgctaccgatgtctggagagcagccagagcgtcgtcaaa
agccccatgaccgacatctgtaacgactacatcttcagtgtctccgctctgctgcataaa
ggagccatggcatgccagtgtgaccctcagggttccctcagcgccctgtgtgaccccagt
ggaggtcagtgtcggtgccgacccaacgtcatggggaggaactgtgaccactgtgctcct
gctaccttcctcttcagccccgccggctgcagaccttgcgagtgcgacctccgcggctca
gtcaccgccatgtgccacgaggcgacgggccagtgcgagtgcgtctcaggggcgacgggg
cgccagtgttcccactgcctgccgggcttctggggcttccctcagtgcagaccgtgtaac
tgtaacggccacagcgagtactgccaccctcagaccggagagtgtcagggctgcagggac
ttcaccaccggacaccactgtgagaggtgtctggacggttaccatggcgacccagagctg
ggttcaggtgaccactgtcgcgcctgcatgtgtcccgatgggccgcgcagtggacggcag
ttttccgacagctgttacctgctgggtaaccagctggtgtgtgtgtgcagctcgggctac
aaaggtgccaggtgtgatcagtgcgctccgggttatttcgggaaccctctggtgcccggc
gggcgctgcctgccctgccagtgcaacaacaacatcgacatgcacgacccggggtcctgc
gacgctcggaccggcgcctgtgtgaagtgcctgcaccacactgagggctacgcctgtcag
cactgcaaactgggttactacggcaacgctggcacgcagagctgcaggaagtgcatgtgt
tacccgatgggcacggctcctcaggcctgttcctcccctcacgactgtcagtgcgatcag
ctcagcggtcagtgtccctgccagcccaacgtggtcggtcagaactgcgaccgctgcgct
gccgatacgtggaacatcgccagcggaacgggctgccagcgctgcgactgcgaccccgac
cactcctacggatcgtcctgtaatgaggtcacaggtcagtgctcctgcaaaccaggtttt
ggtggcaagacgtgtcgggagtgcagagagctcttctggggggatccaaaggtcaaatgt
caagcctgtgactgtgacgctcggggaatctctagcaatcagtgccatcgtgcgacaggt
cagtgcacctgtgtgaaaggtgtgtcgggcctgaagtgtgaccagtgtgcccggggctac
cagggggagttcccctcctgtgagccctgccaccagtgctttgccgtctgggacaacgtg
gtcggcgagctgaccaatcaaactaaacgcctggaggcccaagtgacggagctccagagc
agcggcgtgacggcgccgtataaagaattagtcagcagtctggagaggaacgccaaagct
gtgagggagatcgtggagagcaaccctgcagcggtgaagctggagcagattcaggacctg
atgcacgaaataactggtttgatgtcctacctgaacgggaagctgaacacatcggaggaa
accttggaccttctccacggggacgccaacgccaccgacgctaatttggacgcactgact
gacgaggccgaccggctggagcagagcgtgaaggagctgagacagcaggtgtacgacgcc
aagaacgccaacatccagggggccatggacaccattacagacgcacacaggcagtctatg
atggcggagctccgcgccaacgcctccaccagcgatcctggaaacacagtggagcggtcg
gctgcggtacggaaagccaccgaggacaaactgagcagcggtcagaaggagttcgatcgc
aagcaccagagaaatcagaagaagctcgacaaactgtcgaatgagctgaagcagttggac
ctcgtctcactgagtgaaaagacgtgtggaggtgcagctgaaggcgacagctgctccgac
tcctcctgcggtggtttgggttgtcgtggagacggagcgcctcagtgcggaggagaggga
tgcggtggcctcgtcatcacctcggaaaaagctcttaaatcagccaaagacctggaccag
gagatcctgacggcgatgcaggaggtggacaagctctccaggatggtgtgggaggccaac
aaccgtgcaaacgcggccaaggtgaacgctatggaggtgctgatcaaatccaaccagagc
aaagagcgggtggagcagagcaacgaccagctgcgcaacctcatcaaggagatccgagac
ctgctgaccaatgaaaaagcagacgtttccgtgatcgaggcggtggccaacgaggtgctg
actctggagatgccgacctcgaccgagaagctgcaggagctgacgaaggagatcagggag
aaggtcggcactctgaccagcgtggagtcgatcctcagtcagagcgccgacgacatccag
gctgctgaggcgctgctgaaacaggcgaaggctgccagtgagcaggcgtccaacatgaag
gacacggcggaggtcgtgaaggcggcgctggacgagagcgagcgggctcagaacgtcgcc
atggacgccatccagctggctcagaacaacactaaaggcaccctggacctgctgatcacc
gtggagtcggagacggccatgtcggagctgaagctcagtaacaccacgggtcgtctggtc
cagctggagcgggaggtcgggctgctgaggcagaacaacctggaggtgaaccggctggcg
gagcgggtcgactggatcacagaacaggccaaacagaacgcagacgaggcgcagcaggag
tttgacgtggaggtgaaagataaattcgaggaggcggaggacctggtgggggataaaggg
gagtcggtgctgcaggcgaggaggaaagcggacgaactgcagcaggaggccaaagagctg
ctcgctcagagcagcgccaagctacagagactcagcgagttggagagagcctacgagtcg
aaccagcgagtcctggaggccagagctgcagagctggccgagctggagcgaaaggtccgc
gggatcctggacgagatcagccagaaagtgacgctgtacagcacctgtctgtga
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integrated database retrieval system
