Acanthopagrus latus (yellowfin seabream): 119032235
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Entry
119032235 CDS
T08233
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat02010
ABC transporters
alat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119032235
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119032235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alat02000
]
119032235
Transporters [BR:
alat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119032235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
119032235
NCBI-ProteinID:
XP_036977107
LinkDB
All DBs
Position
1:20957698..20996378
Genome browser
AA seq
2271 aa
AA seq
DB search
MAVSTQLSLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFIDVKKILLYTQNDK
SYEGYKGLLRALGKLQKNTARFKLKDFLRDDETLSHFLHHNASLPHHALKQIVEADVNLE
KVLTKGFGFHLRDLCNSTPLEEFVHIADRNVSQLTQEIICKSSSDWLNKAQSHFLSNLDF
LKPIRKDVRSDPKVVQEVSAATDYLLENLGALAVELSNMNSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDSEPLSTYDNSSTPYC
NNMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMRPKVWNFMENSEEMDLVRTLLQNNASASFLNAQLSGTEWRVSDVSAFLSKASEDKR
SAGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLNNQKFWAGI
VFPDIAHDNSADLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSY
LQDVIEQGIIRAVTGTKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGILWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDP
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KVVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEDDSYNLTTSISLMLFDAVLY
GIMTWYIEAVFPGQYGIPRPWYFPFTRTYWCGEKENNNLSTPLSKKGNADAVCIEEEPGH
IEPGVYIENLVKVYSHGNKLAVDGLSLRFYNGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARMKGLPEEKVKAEMEQ
IVNDVGLPHKRTSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDY
DLTLQSCRNSASTVSYSKKNEKEDSVSQSSSDAGLGSEPESETTTIDVSLISNVIFKHVS
EARLVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDAVELSDGVVPTRIRRHHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLSGT
DGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLALDPGMYGEQFTFMSNDLPEDPHTNKLLEALTEKPGFGTRCMEGEPIPDIPCTT
VEDEWSVPQVSQSLKDVFDKGNWSMENPSPLCECSCGGRKRMLPECPAGAGGLPPPQMKI
SETDTLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSQLLSHTDEI
DDAIAELRRRFRLERGTAADRFFHSLSTFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNN
GILRASLTGGKDPTKFGITAHNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAIEGVIFFVITVLIQYRFCIKARSSTSHLKPIGEEDEDVARERQRILSGAGQSDI
LELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSLVTSGEAY
LAGKSVNTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPD
LRPVMEFIERELPGSTLKEKHRNMLQYQLPTSLTSLARIFSLLSTNKETLSIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKDVHLNKRDAVVVDISQLNSFLTDNKTRESCV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcaactgagtttactgctttggaagaacttcacctaccgacggaga
cagactatccaactgctgattgagatcatatggccccttttcatcttcttcatcctgatc
tcagtcagaatacattatccaccctatgagcaacatgaatgccatttccccaacaaggcc
atgccctcagcaggtacccttccctgggtacaaggcatcatctgtaatgccaacaacccc
tgcttccgtaatcctacgcctggcgagagtcctggggtggtgggaaacttcaatgactct
ataatctcccgtctgttcattgatgtcaagaagatcctgctgtacacccagaatgacaaa
agctacgagggctacaaaggcctgttgagggcccttggaaagctgcagaagaacactgct
cgtttcaagctgaaggactttttgcgagatgatgagaccctttcccacttccttcaccac
aatgcctcacttcctcatcacgcgctgaagcagatcgtggaggctgacgtcaatctggaa
aaggtgctgactaaagggttcggcttccatctccgagacctctgtaactccacaccgctg
gaggagtttgttcacattgctgaccgcaacgtctcccaactgactcaggaaatcatctgc
aagtcctctagtgattggctaaacaaggcgcaaagccacttcctgtccaacttggacttc
ctcaaaccaattcggaaggacgtgaggtctgaccccaaagtcgttcaggaagtctcagct
gccaccgattatcttctggagaacctgggagcactggccgtggagctttccaatatgaat
agttggaaggatatgcgtaaggagatcctgtatctgactgcaaatgccacaggctcccca
aaccagatgtaccaggctgtgtcacgaatcgtctgtggacaccccgagggaggcggcctc
aaaatcaagtctctcaactggtatgaagacaacaactacaaggccctgttcggaaaccat
ggcaacgacagcgacagcgaacctctctccacttatgacaactcttccactccctattgt
aacaacatgatgcggagcctcgagtccagccccatttccaggatgatctggagagctctg
aagcctctgctcatggggaagattctgtacaccccagatactccagccacacagagaatc
atccatgaggttaataagaccttccaggagcttggcgtgctgagggacctcgggggaatg
tgggaggagatgcggcccaaagtttggaacttcatggagaatagcgaggaaatggactta
gtcaggaccctgctccagaataatgccagtgcgtcattcttgaacgcacagctcagtgga
actgagtggcgtgtgtcagacgtgtcggccttcctttccaaggcctcagaggacaagaga
tctgccggatctgcttatacctggagagaagtcttcaacgaaactgaccaggccattcag
actatctcacgcttcatggagtgtgtgaacctggacaaactggagccagtagcgaatgag
gagagactggtcaacaagtccatgggtcttctgaacaaccaaaagttctgggctggaata
gtgtttcctgacatcgcccatgacaacagcgctgacttgccacctaacgtcaactataag
atccgcatggacattgataatgtggagaggacgaacaagattaaagacggatattgggat
cccggtcccagggcagatccctttgaggaccttcgctacgtctggggtggattttcttac
ctgcaggatgtcatcgaacaaggaatcatcagagctgtcacaggcaccaaggagaagacg
ggcatctacattcaacagatgccctatccctgctatgttgatgacattttcctgcgggtg
atgagtcgctcaatgcctctcttcatgacattggcgtggatgtactcagtggccatcatc
ataaagggtgtagtgtatgagaaggaggctcggctcaaggagaccatgaggatcatggga
ctgaacaacggcatcctgtggctcagctggttcatcagcagtttaatcccactcctgatc
agcgccggcttgttggtgatgctactgaagatgggaaacctgctgccctacagtgaccca
ggggtggtgtttcttttcctgggatccttcggcgtagtgacgatcatgcagtgtttcctc
atcagcaccctgttctctcgcgccaacttggcagctgcttgcggtggcattatatacttc
accctctacctaccctatgtcttgtgtgtcgcctggcaagactacgtgggctttggagca
aaagttgtagtgagtctcctgtctcctgtggcttttgggtttggctgcgagtactttgcc
ctgttcgaggagcagggggttggtatccagtggtcgaacctgctggccagccctctggag
gatgacagctacaacctgaccacctctatctccctcatgctgtttgacgccgtactctac
ggaataatgacctggtacatcgaagctgttttccctggtcaatacgggatccccaggcct
tggtatttccctttcactaggacatactggtgtggagaaaaagagaacaacaacctctcc
acccctctatcaaagaagggcaacgctgacgccgtatgtatcgaggaggaaccaggccac
atcgagccgggcgtttacatcgagaatctggtgaaggtctacagccacggaaacaaactg
gctgtagacgggctgtccctgaggttctataacggacagataacctccttcctcggacac
aatggagctggcaagaccacaacaatgtcaatcctgacaggactatttccacccacttct
ggcacagcctacatcctcggcaaggacatccgcactgaactgagcaccatcaggcagaat
ctgggtgtctgtcctcagcacaacgtactttttagcatgctgacggtggaggaacacatc
tggttttacgcccgtatgaagggcctgccggaggagaaggtgaaggctgagatggaacaa
attgtgaatgatgtcggattgcctcacaaacgaacatctcgcaccagcacactgtcggga
gggatgcagagaaagctgtcagtggccctggcttttgttggaggctccaaggttgtaatc
ctggatgaacctactgctggggtcgatccctatgctcgcaggggcatctgggacctgctg
cttaaatacagacaaggccgcaccatcatcctgtccactcaccacatggacgaggctgac
atcctgggtgaccgcatcgccatcatttcccacggcaagctgtgctgtgtaggctcctcc
ctcttcctgaagacccaacttggcactggctactatctgaccctggttaagagagactac
gatctgacacttcagtcctgcaggaattctgccagcaccgtctcttacagcaagaagaac
gagaaggaggacagtgtatcacagagcagttctgatgctggtctgggcagtgagccagaa
agtgaaaccaccaccatcgatgtgtcccttatctccaatgtgatattcaagcatgtctct
gaggctcgtctggttgaggaccttggccacgagctcacttatgtcttgccctatcagtca
gctaaagatggagcctttgtagagctcttccatgagctggatgaccgcctcactgacctg
ggaatatccagctatggaatatctgataccaccctggaggagattttcctgaaagtggct
gaggacagtggcgtggatgctgttgagctatcagatggagtcgtgccaaccagaattcgt
cgccatcatgcatttggagaccaccagagctgcctgaagcccttcaccgaggacgacttt
gactttaacgactctgaaggtgacccagaatcccgggagaccgactggctcagtggaaca
gatggcaaaggttcgtaccaggtcaaaggctggagtctgaagagacagcagtttgttgca
ctgctctggaaacgattcctctacgctcggcgctccaggaaaggcttctttgctcagatt
gttctgccggccgtgtttgtgtgtattgccctggtgttcagtctgattgttcctccattt
ggaaagtacccaagtctggctttggatcctggcatgtatggagaacagttcaccttcatg
agtaatgacttacctgaggaccctcacaccaacaagctgctggaagccctgacagaaaaa
ccaggatttggaacacgctgcatggaaggagaacctataccggacattccctgtacgaca
gttgaggatgagtggtcagtcccgcaagtctctcaaagtctgaaggacgtgttcgacaaa
ggcaactggtccatggagaatccctctcccctgtgtgagtgcagctgtggaggacgcaag
aggatgcttccagagtgtcccgctggtgccggcggacttccaccaccacagatgaagatc
agtgagacggacactcttcagaatctgactggcagaaacatctcagactatctggttaaa
acttacgctcagatcattggaaagagcctgaagaacaagatttgggtcaatgagttcaga
tacggtggattctcgttaggcgccaggagttctcagctgttgtcccacacggatgaaatc
gatgatgcgatcgctgagctgaggagacgcttccgtctggagagaggaactgcagcagat
cgtttctttcacagtctctccactttcatccaaggattggacaccaagaataacgtcaag
atctggttcaataacaagggctggcacagcattggttctttcctcaacgtgatgaacaac
ggcatcctgcgggcaagtctgacaggtggcaaagaccccacaaagtttggcatcactgcc
cacaatcacccgctcaacctcaccaaggagcaactgtcacaagtggcactgatgacgaca
tcagtggatgtgctggtttccatctgcgtgatcttcgccatgtcctttgtccctgcaagc
tttgtagtcttcctcatccaggagagagtgaacaaggccaaacacatgcagttcatcagc
ggagtgcagcctttcctttactggctggccaactttgtctgggatatgtgtaactacatc
gtcccagccacactggtcatcatcatctttgtgtgtttccaacaagacgcctacgtctct
tccaccaatctgcctgtgctggccctgctgctgctgctctatgggtggtccatcacccct
ctgatgtacccagcctcgttcttcttcaagatccccagcacggcctacgtggtcctgacc
agcgttaacatactgataggaatcaacggcagcgtgtccacatttgttctggagctgttt
ggaagcaatgaaatcggtggtatcaacgacatcctgaagaacgtgttcctcatcttccct
cacttctgtctgggtagaggactgattgacatggtgaagaatcaggcaatggctgacgct
ttggagagatttggtgagaatcggttccgctcccctctggcctgggacatggtgggaaag
aacctgtttgccatggccatagagggcgtgatcttctttgtcatcactgtcctcattcag
taccgcttctgcatcaaagcgaggtcgtccaccagtcatctgaaacctatcggagaagaa
gacgaggacgtggccagagagcgacagaggatcctgagcggagcaggacagtcagacatc
ctggagctcaggcagctcaccaagatttacaagcgtaaacagaagccggcagtggaccgg
ctatgtgtcggcatcccccctggagagtgcttcggtttgctgggtgtgaatggcgcaggc
aaaaccagcacctttaaaatgctgactggagactctttggttaccagtggagaggcttac
ctggctggcaaaagtgtgaacacagagatagacgaggtgcatcagaacatgggctactgt
cctcagtttgatgccatcaacgacctgctgaccggaagagaacacctcgagttttacgcc
atcctgaggggcgttcctgagaaggaagtctgtgaggtggcagagtggggcatccggaag
ctcggcttggtcaaatatgtggacaagtcagcgggcagctatagtggaggaaacatgagg
aaactgtccaccgccattgctctcatcggcggaccacctgtagtgtttctggatgaaccg
acaacaggcatggaccctaaagctcgccgtgctctgtggaacgcaatcctcagcatcatc
aaagagggacgatctgtagtcctgacttcacacagcatggaagagtgtgaagcactttgc
acaagaatggccatcatggtcaacggcaggttccgctgcttgggcagtgtgcagcatctc
aaaaacaggtttggtgacggctacaccatcatcctgcgggtggctggccctgacccagac
ctccggccggtgatggagttcatcgagcgggagctgccgggcagcacgctgaaggagaaa
caccgcaacatgctgcagtaccagctgcccacctccctcacctccctcgcccgcatcttc
tccctgctctctacgaacaaggagacgctcagcatagaggactactccgtctcccagaca
actctagaccaagtgtttgtaaatttcgccaaggaccaaagtgatgaggaccatttgaaa
gacgtccatctgaacaagcgggacgctgtggtagtggacatttcccagctaaactctttc
ctcacggacaacaagaccagggagagctgcgtctga
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integrated database retrieval system
