Acanthopagrus latus (yellowfin seabream): 119032305
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Entry
119032305 CDS
T08233
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119032305 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119032305 (dcp1b)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119032305 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
119032305 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
119032305
NCBI-ProteinID:
XP_036977211
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All DBs
Position
14:complement(12775254..12790198)
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AA seq
704 aa
AA seq
DB search
MTATSAGSSSCHPAKGLDISLAALQRQDPYINNIVDVASQVALYTYNNRTNEWEKTEVEG
TLFIYTRLASPRHGFTIMNRLNMENLTEPITKDLDFQLQHPFLLYRNARLVIHGIWFYDK
EDCQRIAQRMKILTQQEQALAQSQGGWLSPGGGGGIIGGGGGEMVRAGRIAGGGGGGGGR
GGSGSGSEAKGVDIIQMLTKARTEYDKSTSEPKEIGGSSVLCGNPNLIKPIPVKPNTQDS
EGAEPKPLSLATLFGSKHHHSPKPDPVSPLATPLAEASAGRVTRPPVARTLTYEETMNSG
RIVTSKGGNIAMAGFSDQGLVAVIGGQMVRDNGGNVVGLTPTTVHQHHHQQQQQQQQQQQ
NQPQHCPAIQKLMQGQRGVGGALQTLSESPENRLCDNGVPLEHHHHHHLFHHHQQHHHHH
HHQQQQLQQDPIKRLFQLQPLPPPASSSTPFTSAAPCFSNPPPAPQQNPHLSSQPIMVDS
VSCAHLQAQQSQQMFFNLSKPQPEAQHPSQSASAIQGTGLLPSQVTNDQVLQPSQGLSSQ
MQGVVSPHELLQKLQLVQQEQSLASHDPPRLLPTLAPRFLGPTPGQAGGSVPNTTAATAG
QKAALQFQVISPQRIPATVAPNLLLSPSVFTQAKSSGILTVGGQEGCPAPSALPIPPLQE
EIRVLSKSQLQATLLKLIQTDSSFLDTIYDAYVSRFASDSSSQY
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgacttctgcaggtagcagcagctgccaccccgctaaaggactggacataagt
ctggctgctctgcagcgacaagacccgtacatcaataacatcgtggacgtggccagccaa
gtcgctttgtacacttacaacaacaggacaaatgagtgggagaagaccgaggtggaaggc
accctttttatctacacgagactggcatctcccagacatggtttcaccatcatgaacagg
ctcaatatggagaatctgacagagccaatcaccaaagacctggacttccagctccagcat
cccttcctgctgtaccgcaatgcgagattggttatccatgggatttggttctatgataag
gaggactgtcaacgcatcgcccagaggatgaagattctgacccagcaggagcaggccctg
gctcagtctcagggtgggtggttgtccccaggaggaggaggaggaataattggaggagga
ggaggagaaatggtaagagcaggaagaatagctggaggaggaggaggaggaggaggaaga
ggaggaagtggaagtggaagtgaagcaaagggagtggacatcatccagatgttgaccaaa
gcacgcacagagtatgacaagtctacatcagaaccgaaagagattggtggcagcagtgtt
ctttgtggaaaccccaatctgatcaaacccatacctgttaaaccaaacactcaggacagt
gaaggtgctgaacccaagcctctctctctggccactcttttcggctccaaacatcaccac
tcacccaaacctgacccagtttctcctttggccacccctttggcagaggcatctgcaggg
agagtcacccgaccacctgtagcccgcacgctgacttacgaggagacgatgaactctggc
aggattgtgacctccaagggagggaacatcgccatggcagggttttcagatcaaggactc
gtggctgtgatcggaggacaaatggtcagggacaatggtggaaatgttgtgggcctgact
cccaccactgtccatcagcaccaccatcagcagcagcagcagcagcagcagcagcagcag
aaccagcctcagcactgcccagccatccagaagctcatgcagggacagagaggggtcgga
ggagctcttcagaccctgtccgagtcccccgagaacaggctgtgtgacaacggggtgcca
ctggagcatcaccaccatcaccatctgttccaccatcatcagcagcaccaccaccaccat
catcatcaacagcaacagcttcagcaggacccaatcaagagacttttccaactccagcca
cttcctcctcccgcctcctcctccacccccttcacctctgcagccccgtgtttctccaac
cctccccccgccccacagcagaacccccatctctcctcacagcccatcatggtggattct
gtgtcatgtgcccaccttcaagcgcaacaaagccagcagatgttttttaacctctccaaa
cctcagccggaggcacagcaccccagccaatcagcttcagccatacagggaacaggtttg
ctgccatctcaggtgaccaatgaccaagtccttcaaccttcacaaggtctgtcttcgcag
atgcaaggtgtggtgtcgccacatgagctcctgcaaaagctccagctggtccagcaggag
caaagcctggcttcccacgatccccctcgactcctcccgaccctggccccgcgatttctg
gggcccacgccaggtcaagccggaggctcggtcccgaatacgaccgcagccaccgcaggt
cagaaggcggcactgcagtttcaggtcatctccccacagcggataccggccactgtggcc
cccaacctgctcctctcacccagcgtgttcactcaggcaaagtcgagtggcatcttgaca
gtgggtggccaggagggctgccctgccccctcagccttgcccattcccccgctgcaggaa
gagatcagagttctgtccaaaagccagcttcaagccacactgctgaaactgatccagact
gacagctcattcctggacaccatctacgacgcctacgtcagccgctttgccagcgactcc
agcagccagtactga
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integrated database retrieval system
