Acanthopagrus latus (yellowfin seabream): 119032496
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Entry
119032496 CDS
T08233
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119032496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119032496
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119032496
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119032496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119032496
NCBI-ProteinID:
XP_036977654
LinkDB
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Position
14:complement(21055308..21068507)
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AA seq
570 aa
AA seq
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MFGANRKKFMEGGVESDYADDSSLYYTQQSMFPPHRADKDMLASSSASSTGQLSQLGASL
YGPQSALGFPMRGMNSSTAPQLSRSGLNQSGNQLPSHASTPNTGTMHTPPSPSRGILPMS
SRSVMNHSQQVGGPTGQSAGMVGGVGVGGERGGAGGVGAGRSSSMGSPSRSSPSIIGMPK
QQQARQPFTINSMSGFGVNRNPGFNMNNSLSNNIFNGTDGSENVTGLDLSDFPALADRSR
RDGGSNPTPLLNPLAGRAPYGLGLAVEQNKKFELLIGMVTKPSSEQSQDFSIHNEDFPAL
PGPNYQTKDPTSTNEDSKTDFFFPPFLSNQNLNSSGKPASNSDGPKFPGDKSSAPSNNNQ
QKKGIQVLPDGRVTNIPVGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLN
SPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLSRYGEDLLFYLYYM
NGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNAYERGTYYFFDCLNWRKV
AKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaaccggaagaagtttatggagggaggggtagagagcgactacgccgac
gactccagcctctactacacccaacagtccatgttccctccacaccgcgctgacaaagac
atgctggcgtcttcctctgcttcctcgacgggtcagctgtcacagctgggagccagttta
tatggcccgcagagtgcgttggggtttcccatgcggggcatgaacagcagcacggcaccg
cagttaagtcgaagtgggttgaaccagtcaggcaaccagctccccagtcacgccagtaca
cccaacactggcacaatgcacacgcctccctcaccgagcaggggtattttgccgatgagc
agccggagcgtcatgaaccacagccagcaggtggggggtccgacggggcagtcggctggg
atggtaggaggagtgggggtcggaggagagaggggaggtgccggcggtgtcggagcaggc
aggagcagcagtatggggagtcccagccggtcgtcacccagcatcatcggcatgcccaaa
cagcagcaagcacggcagcctttcaccatcaacagtatgtcagggttcggggtgaacagg
aatccaggtttcaacatgaacaactccctctccaacaacatcttcaacggcacagacggc
agtgagaatgtgacggggttggacctgtcagatttcccagcgttagcagacaggagtcgg
agggacggaggctcaaatcccaccccgctgctcaacccgctggccggtcgggctccctac
ggtcttggactggcggtcgaacaaaacaagaagtttgaacttctcattggcatggtaacc
aagccgtccagtgaacagtcgcaggacttctccatccataacgaagatttcccagctctc
cctgggccaaactaccaaacaaaagaccccaccagcaccaacgaggacagcaaaacggac
ttctttttccctccgtttctgtccaatcagaatctgaactcatcaggaaagcccgcctct
aattcagatggtccaaagttccccggcgacaagagctccgcaccgagcaacaacaaccag
cagaagaaagggattcaggtgcttcctgacgggcgggtgaccaacatcccggtcggcatg
gtaacggaccagtttgggatgatcggcttgctgacgttcatccgggcggcagagacggac
cccggcatggtccacctggcactgggctcagacctcaccacgctcggcctcaacctcaac
tcacctgagaatctctatcctaagtttgcgtctccgtgggcgtcggctccgtgtcgaccg
caggacatagacttccacgtcccctcagagtatttaaccaacatccacataagggacaag
ttagcagctatcaagttgtctcggtatggtgaagatctgctgttttatctctactatatg
aacggaggagacctactacaactcctggctgcagtagaactgtttaacagggactggagg
taccataaagaggagcgggtttggatcacccgggccccggggatggagcccacgctgaag
accaacgcctacgagagagggacctactacttcttcgactgcctcaactggaggaaggtg
gccaaggagtttcatctggaatatgacaaactagaagagcgacctcacgttccctccaca
ttcaactacaatcctgcccagcaggccttctga
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