Acanthopagrus latus (yellowfin seabream): 119033173
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Entry
119033173 CDS
T08233
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119033173 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119033173 (kcnma1a)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
119033173 (kcnma1a)
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Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
119033173
NCBI-ProteinID:
XP_036978776
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Position
15:complement(4934174..5086693)
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AA seq
1307 aa
AA seq
DB search
MLAEADGTVPHGSDSSMRTSNIINNINPDSSILISKMEDVVIPFSSEVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKTKEAQKVNNPANNQAADRPKTGDEK
DQEAPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRLIYSKMSVYKRMKLACCFDCGRSEQDCSCMSGSVHSNMDTLQRAYP
LSSVSVHDCATTLRASKYKYNGYVRSPADGATTPGNIGSQKEAGVRFKADCNLVEDEHPS
TLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMDMNVKRYDSTGMFHWCPSK
EIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIVFVG
SLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDASLQDK
ECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGSNIPI
ITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIR
TLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGD
LFCKALKTYNMLCFGIYRLRDAHMTVPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHN
AGQSRTSLSHSSHSSHSSSKKSSSVHSIPPSNRQNRSSKTREARDKQNATRMNRMGQEKK
WFTDEPENSYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggccgatggcaccgttccccatggaagcgacagctctatgaggacaagc
aatatcattaataatatcaatccggactcttcaatcttaatatccaagatggaagacgtt
gtcatcccgttctcgtccgaggtgccctgcgacaataatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgttttttgggggtctcttcatcatcctgctatggagg
acccttaaatatctgtggactgtttgctgccactgcaacatcaaaaccaaggaggctcag
aaggtgaacaaccccgccaacaaccaggcagcggacagaccaaagaccggcgatgagaag
gaccaggaggccccggccagcgaggtgggatggatgacttcggtcaaagactgggccggt
gtcatgatctccgctcagacgctcaccggcagagttctggtggtgttagtgtttgcgctc
agcatcggggcccttgggatatactttatagactcctcagatcctatagaatcctgccag
aacttctacaaagatttcacgttacagatcgatatggccttcaacgtcttcttccttctc
tactttggcctgcggttcatagcagccaacgataagctgtggttctggctggaggtcaac
tcagtggtcgacttcttcactgttcctcccgtgtttgtctctgtctacttaaacagaagc
tggctcggtttacgattcctgagagcgctaagattgatacagttctcggaaatcttacag
tttttgaatatcttgaaaacaagcaattccatcaagctggtgaacctgtgttccatcttc
ataagcacatggctcacagctgctggattcatacatttggtggaaaactcaggggatcct
tgggaaaacttccagaattcccagtcactttcctactgggaatgtgtctatttgctgatg
gtgacgatgtctacggtgggctacggggatgtctatgcaaaaaccaccttggggcgcctg
ttcatggtcttcttcatcctcggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcatattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgttgaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgtcattttacccaagtagaattctaccag
ggatctgttctcaaccctcacgatctcgccagagtgaagatcgagtcagcagatgcctgc
ctaatcctagccaacaaatattgtgcagatcctgatgctgaagacgcctccaacatcatg
agggttatttcgatcaagaattaccatcctaagatcagaataatcacacaaatgctacaa
tatcacaacaaggcccatctgctcaacattccaagctggaactggaaggagggcgatgat
gctatctgcctggcggagctgaaggcaggcttcatcgcccagagctgtctggcccaaggc
ctgtccaccatgcttgccaacctcttctccatgaggtccttcattgagattgaagaggac
acatggcagaagtattacctagaaggagtggctaatgagatgtacacagagtatctgtcc
agtgcctttgtgggcctctccttccccactgtctgtgagctgtgttacgtgaagctgaag
ctgttgcttattgccatcgaatacaagtctgagcagagagagagcagaagccgaaagcgc
attctcatcaacccgggcaaccatgtcaagatgcaggagggaacactgggcttctttatc
gccagtgatgccaaagaagtaaagagggcatttttctactgcaaagcttgtcacgatgac
atcacagaccctaagcggatcaagaagtgtggctgcaaacgactgatttattccaagatg
tccgtctacaaacgaatgaaactggcatgttgttttgattgcggccgttcagagcaagac
tgctcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctaccca
ctttcctctgtctctgttcatgattgcgcaaccactttacgtgcctccaaatataagtat
aatggatatgtcagatcaccagcagatggcgctacaacaccagggaacattgggagtcag
aaagaggctggcgttcgattcaaagctgattgcaatttagtcgaagacgagcatccatcg
actctctcgcccaaaaaaaagcagcgcaacggagggatgcgaaactcacccaactgctcg
cccaaaatgatgagtcgacacgacccccttcttattcctgggaacgagcaaatcgagaac
atggacatgaacgtgaagaggtatgactcgacagggatgtttcactggtgcccatcaaag
gagatcgaaaaagtcatcctgacccggagcgaagcctccatgacagtgctgagcggccat
gtggtggtctgtatatttggggatgtcacgtccgctttagtggggctgcgaaacttggtg
atgcctttaagagccagcaacttccattaccacgagctaaagccaattgtttttgtgggc
tcgctggactacctgcgaagagagtgggaaactttacacaacttccccaaggtctccata
ttacctggtacaccattaagtcgggcagatttaagggctgtcaacatcaacctctgcgac
atgtgcgtaatactgtcagccaatcagaacaatatcgaagatgcctcactgcaggataag
gaatgcatcttggcatcactcaacatcaaatctatgcagtttgatgacagcatcggggtc
ttacaggctaattcccaaggtttcacgcctcctggaatggacaggtcatctccagacagc
agtccagtacatggctttgtgcgtcaggcttctgtcaccaccggatccaacatccccatc
atcacggaactagtgaacgactcaaacgttcagttcctggaccaagatgatgatgacgac
ccagacacagagctgtacctcactcagcccttcgcctgcggcaccgccttcgctgtcagt
gtactcgactccctgatgagtgcgacgtacttcaacgataacatcctcacgctgattcgg
acgctggtcacagggggagccacaccagagctggaggccctgctggctgaggagaacgct
ctcagaggaggctacagcacaccgcagacgctggccaacagagacaggtgtcgcgtcgcc
cagctagccctctacgacgggccatttgccgacttgggggatggcggctgctacggagat
ttattttgcaaggcactgaagacgtacaacatgctgtgttttggaatctacagattaaga
gacgctcacatgactgtaccaagccagtgtacaaaacggtatgtgatcacgaacccaccg
tatgagtttgagctcgtgcccacagacctgatcttctgcctcatgcagttcgaccacaac
gcaggccagtcccggacaagcttgtcccactcgtctcactcctcccattcctccagcaaa
aagagctcctcagtccactccatcccgccctccaaccggcagaaccgcagcagtaagacc
cgggaggcccgcgacaaacagaatgctacaaggatgaatagaatgggccaagaaaagaaa
tggtttacagatgaaccagaaaattcctacccacggaacattcagatcaagcccatgagc
actcacatggccaaccaagtcaaccaatacaaatccactagtagtctgattccaccaatc
agagaagttgaagatgaatgctga
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