Acanthopagrus latus (yellowfin seabream): 119033193
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Entry
119033193 CDS
T08233
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119033193 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alat04990
]
119033193 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
alat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119033193 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119033193
NCBI-ProteinID:
XP_036978841
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All DBs
Position
15:14090889..14098554
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AA seq
322 aa
AA seq
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MPLRVVMQGPGPWGFRLVGGKEFEQPLTISRVTPGSKAAQANLCIGDMILAIDGEPTENM
THLEAQNKIKGCIEQMVLSIDRSESKMWSPLSSEGGKTHPYKMNLASEPQEVKHIGSSHN
RSALPFTGFGSKVVTNQYNNPSSLYSSENIKDFNSAVDEVKTMATANEPNSKAPSDPSQT
EKRPAVAADSEVYKMLQENQQTDEPPRQSASFKVLQGILETGDCDKPSGFRSVKAPSTKI
GSSVGNADKLPTCDKCGSGIVGMVVKLRDKFRHPECYTCTDCDVNLKQKGHFFVEDKIYC
ETHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgggtggtgatgcagggtcctggaccctggggcttcaggctggtcgggggg
aaggagttcgagcagccgctgactatctcccgggtcacccctgggagtaaagccgcccag
gccaacctgtgtattggagacatgatcttggccatcgacggagagccgacagagaacatg
actcacttggaagcacagaacaagatcaaggggtgcatagagcaaatggtgctctccata
gacaggtcggaaagtaaaatgtggtcacctctttcatctgagggagggaagacacatccg
tacaagatgaatcttgcatcagagccacaagaggtgaaacacatcggctcgagccacaac
aggagcgctctgccattcactggttttggctccaaagtcgtgaccaaccagtacaacaac
ccatctagtctctactcctcagagaacatcaaggacttcaactcagccgtggacgaagtt
aaaacaatggctacagcgaacgagcccaacagcaaagctccgtcagatccatcgcagaca
gagaagaggccggctgtagcagcagattcagaggtctacaagatgctgcaggagaaccaa
cagactgacgagcctcctcgccagtctgcttcattcaaagtgctacaggggattcttgag
acaggtgactgtgacaaaccgtcaggcttcaggagtgtgaaagccccctcaacaaagatc
ggatcatccgtggggaacgcagacaagttacccacctgcgacaaatgtggatccggcatt
gtggggatggtggtgaagctgagggataagttccgtcaccccgagtgctacacctgtaca
gactgcgacgtcaacttaaaacagaagggacatttctttgtggaggacaagatttattgt
gagacgcatgcacgcgagcgagtgactccgcctgagggctacgatgtggtcaccgtcttc
cccaagtag
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