Acanthopagrus latus (yellowfin seabream): 119033227
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Entry
119033227 CDS
T08233
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119033227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119033227
Transcription factors [BR:
alat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
119033227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
119033227
NCBI-ProteinID:
XP_036978993
EnsemblRapid:
ENSALTG00010021958
LinkDB
All DBs
Position
1:156599..166931
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AA seq
509 aa
AA seq
DB search
MLAASGAGMGTRTGAGRAGNGARLSSLAMNTAAPGPDTDTDGGQFDDRDYSTELVYSGSD
QDSDSGDDEDTAGSGGDRRGVKRERSEREVGHQSAASSGGLSGGHGGVSPGVPGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRSDPSSDQRMSATGFEETDLTYQVSDADGCPEV
AKDLVKPAFTISNLPGTTQSTPSSSSTSVSMQVQTSTPSWQPSSTNGTVLKTSAGVVLPG
SFTLMSGASLPPGTHTIPLSQLQGQPLAIQGSVASSPTSTLHAPPTQPTTLLRLPATVSL
SGGGVPQQLQTFQVQTSSHQTSTSQSCSDVHNPASSAASLPASVSSSSSSVAGHMMYPGG
HTVMYATPTPSLSDGSLTVLNTFPPTGHTQSHEPGSLPQVFLTSLPPVTAQIPVSAVQLH
PMVISQQSSSSNLTELQVVSLDVHQSKDD
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctggcggcgagcggagccggaatgggtaccagaactggagctgggcgtgcgggtaac
ggagccaggctcagctccctcgccatgaacacggcggcaccgggaccggacacagacacc
gacggaggccagtttgacgacagagactacagcaccgagctggtttacagcggctccgat
caggactctgactccggggacgatgaagacacagcgggttccggcggggataggagaggc
gtgaagcgggagaggagcgagagggaggtggggcatcagtccgcggcctcctccggaggg
ctgagcgggggtcacggcggggtcagccccggggtcccaggagccaaacccggcaagaaa
accagaggaagagtgaagatcaagatggagttcatcgacaacaagctgcggaggtacacg
acgttcagcaagaggaagaccggcatcatgaagaaggcgtacgagctgtctacgctgacc
ggtactcaggtgctgctgctggtcgccagtgagacgggtcatgtgtacacgtttgccacc
aggaagctgcagcccatgatcacgtcagagacgggcaaagctctgatccagacctgcctc
aattctccggactcgccgcctcgctcagacccttcctccgatcagaggatgagcgccaca
ggctttgaggagactgacctcacctaccaggtgtctgatgctgacggctgccccgaggtc
gccaaggatcttgtcaaaccagcattcaccatctccaacctgcctggcaccacacagtcc
accccgtcctcctcctccacgtcagtgtccatgcaggtgcagacgagcaccccctcctgg
cagccctcctccaccaatgggacagtgttgaagacatcagctggtgttgtacttcctggt
agcttcaccttgatgtcaggtgcctcactgcccccagggacacataccatccccctcagc
cagctgcagggccagcctctggccatccagggctccgtggcctccagccccacctccacg
ctgcacgctccgcccacacagccaaccacgctgctccgcctccctgccactgtgtcactg
tcaggaggcggagtccctcagcagctgcagaccttccaggtgcagaccagcagtcatcag
acttccaccagtcagagctgctcagatgtacacaacccagcctcctctgcagccagtctt
cctgcctccgtcagctcttcctcctcctcggtggccggtcacatgatgtacccaggaggt
cacacggtgatgtatgccactccaacaccctcactcagcgacggtagcctcactgtcctg
aacaccttccccccgacaggccacactcagtcacatgaaccaggttctctcccgcaggtc
ttcctcacatctcttcctccagtcactgcacagattccggtttctgcagtccagctccac
ccgatggtcatcagtcagcagagcagcagcagcaacctgacggagctgcaggtcgtcagt
ctggatgtccaccaatcaaaagacgactga
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