Acanthopagrus latus (yellowfin seabream): 119033258
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Entry
119033258 CDS
T08233
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119033258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alat04812
]
119033258
Cytoskeleton proteins [BR:
alat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119033258
Intermediate filaments
Intermediate filament-binding proteins
119033258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
119033258
NCBI-ProteinID:
XP_036979015
LinkDB
All DBs
Position
15:27888442..27982646
Genome browser
AA seq
2374 aa
AA seq
DB search
MEFQSATSSLGGPLSPGPLSPTMDYPGPLSPSPGGPGPSLASPGRGPSPSLSPIRGPSPN
PGFSGQAAFNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRM
LIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTL
GLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKSAGYPNVNIHNFTTSWRDGMA
FNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSII
TYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNN
RKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGK
LISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQ
DNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVVAVAKELEAESYHDIKRITARKDNVI
RLWEYLLELLKARRHRLEMNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLL
QKHALVEADISIQADRVRNVNRNAQKFADDMEGYKPCDPQIIRDRVAHMDFCYQELSQLA
AERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSEDYGKDLTGALRLLSQHKAFEDEM
SGRAGHLQQTIKQGDELVANNHFGADKIKERIQDIQEQWAALERLSAVRKARLQEACNQH
QFQADADDIDTWMLDVLRIVSSVDVGHDEFSTQALVKKHKDVAEEISSYRPVIEALHEQS
RTLPPEKANSEEVQNRLAGIEERYKEVVELTRLRKQALQDALSLYKMFSEANACEVWIDE
KEQWLNSTEIPEKLEDLEVVQHRFESLEPEMNSQASRVAVVNQVARQLIHNGHPSEKEIK
SQQDKLNTRWSQFRDLVDQKKDSLNSALGVQNYHLECNETKSWIKEKTKVIESTQELGND
LAGVMALQRKLTGMERDLAAIEDKLGDLGKEADRLASEHTEQSDAIKGRLAEITGVWDEM
KDTMKNREESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMPNTLTEAEKLLAQHEGI
KNEIRNYEEDYQKMRDMGEMVTQDQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQ
SHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKINA
VVDTGRRLVTDGNISAERIQEKVDSIDQRHKKNRAAASDLLTRLKDNRDLQKFLQDCQEL
SLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIDTEGKALMAEKPET
EAMVKEKLASLKTMWEDLESTTQTKAKCLFDANKAELFTQSCADLDKWMAGLEGQLQSDD
YGKDLTSVNILLKKQQILESQVEVRQKEVEELQSQSQALSQEGKGSEEVDGQRISVEKKF
HCLQEPLKKRRDNLMASREIHQFNRDVEDEILWVEERMALATSTDHGHNLQTVQLLIKKN
QTLQKEIQGHQPRFDDIFERSQHVLREDSPTAEAIRQRLAELQSLWEQIKKETEKRHGRL
SEAHEAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADTV
HQLSSTSRGLVAAEHPDSERIGMRQSQVDKLYAGLKDLSEERRGKLDERLRLFQLNREVD
DLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNRQADELINS
GHGDAATIAEWKDGLNEAWADLLELIDTRTQILSASYELHKFYHDAKEILNRILDKHKKL
PEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGE
VLEAWKNLLEAAEGRRVKLVDTGDKFRFFSMVRDLMLWMEDVIRLIEAQENPRDVSSVEL
LMNNHQGIKAEIDARNDSFTACIELGKTLLARKHYASEEIKEKLLQLTDKRKDMIDKWED
RWEWLRLVLEVHQFSRDAGVAEAWLLGQEPYLSSREIGLNVDEVEKLIKRHEAFEKSAAT
WEERFAALERLTTMELLEVRRAQEEEEKKRQPPAAEAEPGDAAAQQREGEPVSQNGLPSD
QESPRDNVEGGEQVNGVSEPSPAGSPGASRKGKASQAATLPAKTQPDAPTSQLEGFLHRK
HEWEGHNKKASSRSWHNVYCVINQQEMGFYKDQKSASQGIPYHSEIPVSLKDAVCEVALD
YKKKKHVFKLKITDGNEYLFQAKDDEEMNTWISAISTAMSGDKVEVTPSSHSTPAPAARA
QTLPASVASVTAESSPGKREKDKEKRFSLFSKKK
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcagagcgccaccagcagtctcggcggccctctttcccccggccctctctcc
ccgaccatggactatccaggccccctgtccccctcgccgggtggccccggcccctctctc
gcaagccccggccggggtcccagccccagcctcagccccatcagggggcccagccccaac
cccggattctcgggccaggccgccttcaactacaaccagctggaggggaggtttaaacag
cttcaagatgagcgtgaggcggttcagaagaagaccttcaccaagtgggtcaactcacac
ctgtccagggtctcctgtcggatcaccgacctgtacatggacctgagggacggacgcatg
ctcatcaagctgctggaggttctgtcaggagagagactgcccaaacccaccaagggccgg
atgcggatccactgcctggagaacgtggacaaggctctgcagttcctgaaggagcagagg
gtccacctggagaacatgggctcccacgacatcgtggacggaaaccaccgcctcacgctg
ggcctcatctggaccatcatcctccgcttccagatccaggacatcagcgtggagacggag
gacaacaaggagaagaagtcggctaaagatgctctgctgctctggtgtcagatgaagtcg
gcaggatatccaaacgtcaacatccacaacttcaccaccagctggagagatgggatggcc
ttcaacgccctcatccacaaacacagacccgacctgatcgactttgataagctgaagaaa
tcaaacgctcactacaacctgcagaatgctttcaacctggccgagcagcacctgggcctc
accaagctgctggaccccgaggacatcagcgtggaccaccctgacgagaagtccatcatt
acctacgtggtcacctactaccactacttctccaagatgaaggctctgaaggtggagggg
aagaggatcggcaaggttctggacaacgccatcgagacggagaagatgattgagaagtac
gagtctctggcctcggacctgctggagtggatcgaacagaccatcatcatcctcaacaac
aggaagttcgccaactctctggtgggagtccagcagcagctgcaggccttcaacacgtac
cggaccgtggagaaaccacccaagttcacagagaaaggaaacctggaggttctcctgttc
accatccagagtaagatgagagccaacaaccagaaagtttacactccccgagagggaaaa
ctcatctctgacatcaacaaggcgtgggagcgtctggagaaggcggagcacgagcgcgag
ctggctctgaggacggagctgattcgtcaggagaaactggagcagctcgcccgacgcttc
gaccgcaaagccgccatgagggagacgtggctgagcgagaaccagaggctggtctcccag
gataactttggatttgacctccaggccgttgaagcggccactaagaaacatgaagccata
gaaacagacatcgcagcgtacgaggagcgagttcaggcggtggttgccgtggcgaaggag
ctggaggcggagagttaccatgacatcaaacgcatcacggccaggaaggacaatgtgatc
cggctgtgggagtacctgctggagctgctgaaggcccgcaggcaccggctggagatgaac
ctgggcctgcagagagtcttccaggagatgctctacatcatggactggatggacgagatg
aagatgctgctgctctctcaggattatgggaaacacctgctgggtgtggaggacctgctg
cagaaacacgctctggtggaggccgacatcagcatccaggccgaccgagtccggaacgtc
aaccgcaacgcccagaagtttgccgacgacatggagggttataaaccctgcgaccctcag
atcatccgggaccgcgtcgctcacatggacttctgctaccaggagctgagccagctggcg
gctgagcggcgagctcgcctcgaggagtcccgacgcctctggaagttcttctgggagatg
gccgaagaggagggctggatcagggagaaggagcagatcctgtcctccgaggattatggg
aaggatctgacgggagcgctgcgactgctgagtcagcacaaagccttcgaggacgagatg
agcgggcgagccggccacctgcagcagaccatcaaacagggcgacgagctggtcgccaac
aaccacttcggagccgacaagatcaaagaacgtatccaggacatccaggagcagtgggcg
gctctggagcgtctctctgcggtccgtaaagctcgtctgcaggaggcctgcaaccagcac
cagttccaggccgacgccgacgacatcgacacgtggatgctggacgtgctgcggatcgtc
tccagcgtggacgtcggccatgacgagttctccactcaggctctggtgaagaagcacaag
gacgtggcggaggagatcagcagctaccggcccgtcatcgaggcgctgcacgaacagtcc
cgcacgctgccgcccgagaaggccaactctgaggaggtccagaaccggctcgcgggcatc
gaggagcgctacaaggaggtggtggagctgacccggctcaggaagcaggcgctgcaggac
gctctgtcgctctacaagatgttcagcgaagccaacgcctgcgaggtttggatcgacgag
aaggagcagtggctcaacagcaccgagatccccgagaaactggaggacctggaggtcgtc
cagcaccggtttgagagtctggagccggagatgaacagccaggcgtcgcgggtcgccgtg
gtgaaccaggtcgcccggcagctgatccacaacggacatcccagtgagaaggagatcaaa
tcccagcaggacaaactcaacaccaggtggagtcagttcagagacctggtggaccagaag
aaagacagtctgaactcggctctgggagtccagaactaccacctggagtgtaacgagacc
aagtcctggatcaaagagaagaccaaggtgattgagtcgacccaggagctggggaacgac
ctggccggcgtcatggccctgcagaggaagctgacggggatggaacgcgacctggccgcc
atcgaagacaagctgggcgacctgggcaaggaggcggaccgcctggcctccgaacacacg
gagcagtccgacgccatcaagggacgtctggctgagatcactggcgtctgggacgagatg
aaggacaccatgaagaaccgggaggagtcgctgggcgaggccagcaagctgcagcagttc
ctgcgcgaactggacgacttccagtcgtggctgtcgcggacgcagacggccatcgcctcc
gaggacatgcccaacacgctgaccgaggccgagaagctgctggcccagcacgagggcatc
aagaacgagatccgcaactacgaggaggactaccagaagatgcgggacatgggcgagatg
gtgacgcaggaccagacggacgcgcagtacatgttcctgcgacagcggctgcaggcgctc
gacaccggctggaacgagctgcacaagatgtgggagaaccggcagaacctgctgtcccag
tcccacgcttaccagctgttcctcagggacaccaagcaggccgaggccttcctcaacaac
caggagtacgtcctggctcacactgagatgcccaccactctggagggcgccgaggccgcc
atcaagaagcaggaggacttcatgaccaccatggacgccaacgaggagaagatcaacgcc
gtggtcgacaccggccggcgcctcgttaccgacggcaacatcagcgccgagcgtatccag
gagaaggtggactccatcgaccagagacacaagaagaaccgagcggctgccagcgacctg
ctgacgaggctgaaggacaacagagacctgcagaagttcctgcaggactgccaggagctg
tccctgtggatcaacgagaagatgctgacagctcaggacatgtcgtacgacgaggccaga
aacctgcacagcaagtggctcaaacatcaggccttcatggccgagctgcagtccaacaag
gagtggctggacaagatcgacacggaggggaaggcgctgatggcagagaaaccagagacg
gaggcgatggtcaaagagaagctggcgtccctgaagacgatgtgggaggacctggagtcg
accacgcagaccaaggccaagtgtctgttcgacgccaacaaggcggagctgttcactcag
agctgcgccgacctggacaagtggatggccggcctggagggacagctgcagtccgacgac
tacggcaaagatctgacctccgtcaacatcctgctcaagaaacagcagatcctggagagc
caggtggaggtgcgtcagaaggaggtggaggagctgcagagccagtctcaggccctcagt
caggaggggaaaggctccgaggaggtggacggtcagaggatcagcgtggagaagaagttc
cactgcctgcaggagccgctgaagaagagacgggacaacctgatggcctcccgcgagatc
caccagttcaaccgggacgtggaggacgagatcctgtgggtggaggagaggatggctctg
gccacatcgaccgaccacggacacaacctgcagactgtacagctgctcatcaagaagaac
cagaccctgcagaaggagattcagggtcatcagccgcgattcgacgacatcttcgagcgc
agccagcacgtcctgcgggaggacagcccgacggccgaggccattcgccagcggctcgcc
gagctccagtcgctgtgggaacagatcaagaaggagacggagaagcgtcacggccggctc
agcgaggcccacgaggcccagcagtactacttcgacgccgccgaggccgaggcctggatg
agcgaacaggagctctacatgatgtcagaggagaaggccaaggacgagcagagttcggtg
gccatgctgaagaagcatcagatcctggagcaggcggtggaggattacgccgacaccgtc
caccagctgtccagcaccagccgaggcctggtggctgccgaacaccccgacagcgagcgt
atcggcatgcgtcagtctcaggtggataaactctacgccggcctcaaggatttgtcggag
gagcgtcgggggaaactggacgagcgtctgcgtcttttccagctcaaccgggaggtggat
gatctggagcagtggatcgctgagagggaggtggtggcgggatcccacgagctggggcag
gactacgaacacgtcaccatgctgcaggagcgtttcagagagtttgcccgtgacaccggg
aacatcggccaggagcgcgtggacggcgtcaaccgccaggcggacgagctgatcaacagc
ggccacggcgacgccgccaccatcgcagagtggaaggacggcctgaacgaggcctgggcc
gacctgctggagctcatcgacacccggacgcagatcctctccgcctcctacgagctccac
aagttctaccacgacgccaaggagatcctcaaccgcatcctggacaaacacaagaagctc
ccggaggagctgggccgggaccagaacacagtggagaccctgcagaggatgcacaccacc
ttcgaacacgacattcaggcgctgggaactcaggtgcggcagctccaggaagacgcggtc
cgcctgcagtcggcctacgccggagacaaagctgacgacattcagaagagagaaggagag
gtcctggaggcctggaagaacctgctggaggcggcggagggtcgccgggtgaagctggtc
gacaccggagacaagttccgcttcttcagcatggtgcgcgacctgatgctgtggatggag
gacgtcatccgtctgatcgaggcccaggagaaccccagggacgtgtcatcggtggagctg
ctgatgaacaaccatcagggcatcaaggcggagatcgacgctcgcaacgacagcttcacc
gcctgcatcgagctgggaaagactctgctggccaggaagcactacgcttcagaggagatt
aaagaaaagttgctacagttgacagacaagaggaaagacatgattgacaagtgggaggac
agatgggagtggctgagactggtcctggaggtgcaccagttctcccgggacgcaggtgtg
gccgaggcgtggctgctgggtcaggagccgtacctgtccagcagggagatcggcctgaac
gtggacgaggtggagaaactcatcaaacgccacgaggccttcgagaagtcagccgccacc
tgggaggaacgcttcgccgctctggagaggctgaccacgatggagttactggaagtgaga
agagcgcaagaggaagaagagaagaagagacaacctccggccgctgaggccgagccgggc
gacgctgccgctcagcagagggagggtgagccggtgtctcagaacgggctgccgtccgat
caggagtctcccagggataatgttgaaggaggcgagcaggtgaacggggtgtcggagccc
agtccagccgggtctcccggggcgtctcgcaagggcaaggccagccaggcagcgacgctg
ccggccaagacccaaccagacgccccgacgtcccagctggagggcttcctgcaccgcaag
cacgagtgggaggggcataacaagaaggcttcgagcaggtcgtggcacaacgtgtactgt
gtgatcaatcagcaggagatgggtttctataaggatcagaagagcgccagtcagggaatc
ccctaccacagcgagatcccagtgagcctgaaggacgccgtctgcgaagtggcgctggac
tacaagaagaagaaacacgtcttcaaactcaagattactgacgggaacgagtatttgttc
caagccaaagacgacgaggagatgaacacgtggatctcggccatctccaccgccatgtcg
ggcgacaaggtggaggtcacccccagcagccatagcacgcccgctcccgccgcacgcgct
cagacgctgccggcctccgtggcttcagtgacggccgagtccagcccgggcaaacgggag
aaggacaaggagaaacgcttcagtctgttcagcaagaagaaatag
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integrated database retrieval system
