Acanthopagrus latus (yellowfin seabream): 119033317
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Entry
119033317 CDS
T08233
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119033317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119033317
03016 Transfer RNA biogenesis [BR:
alat03016
]
119033317
Enzymes [BR:
alat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
119033317
Messenger RNA biogenesis [BR:
alat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
119033317
Transfer RNA biogenesis [BR:
alat03016
]
Prokaryotic type
tRNA degradation factors
119033317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
119033317
NCBI-ProteinID:
XP_036979128
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All DBs
Position
15:18347461..18356251
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AA seq
770 aa
AA seq
DB search
MRYLLRLGHSFARLHVRLCHQSVYNSHSKQQSVRVDLGDKKLEISSGKFARFADGSAVVQ
LGETSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDNEILTSRLI
DRSIRPLFPSGYFYDTQVLCNLLAVDGVNDPAVLAINAASAALALSDIPWNGPIGAVRMG
MVDGEMLVNPTRSEMSSSSLNLIVAAAPSSQVVMIEASAENMLQQDFCHAVKLGVKHSQQ
IILTIQQMVRERKVTKRTPIKVFTAPTDIVEHARQLASERIYAVFTDYTHDKISRDEAIN
KIRLETEENLKEKFPQAEPFDVIESFNTVSKDVFRSLVLNEYKRCDGRELTSLRNISCDV
DLFKPLHGSALFQRGQTQVLSSVTFDSLESSVKADPITAALSGIKDKNFMLHYEFPPYAT
NEIGKMGGINRRELGHGALAEKALRPVIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSPVAGVAVGLISKAVPGKPDEIQDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKVVMEAIQQATVAKREILGIMNKCIASPRGTRKENGPVVENVRVP
VSKRALFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGAMAEAQELITDICKDDQE
QQLEFGAVYTATITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAATLVKTMSEKQSISMGSSNSHTDSTGL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggtacttgctccgactggggcactcgtttgcccgccttcacgtccgcttatgtcac
caaagtgtttacaacagccattccaaacagcagtccgtgagggtggaccttggagacaag
aaacttgaaatctcttcagggaagtttgctagatttgctgatggatctgctgtggtgcag
ctgggagagacgtctgtgatggtcactgctgtgagcaaaaccaaaccttctccatctcag
tttatgcctcttgtggttgactacaggcagaaagctgctgcagcaggtcgaatccccact
aactatttgaggcgagagctgggcaccactgacaatgagatcctcaccagcagactaata
gacaggtcaattagaccacttttcccttctggttacttttatgatactcaggtcctttgt
aacttgctggcagttgatggtgtcaatgatccagctgtgctggctataaatgcagcttct
gctgctctggccctgtccgatatcccctggaatggacccattggtgctgtgcgaatgggc
atggtagatggagagatgctggtcaaccccaccaggtcagagatgtcttccagcagtctc
aacctgattgtggccgcagcccccagcagtcaagtggtgatgattgaggcatcagctgag
aatatgctgcagcaggacttttgccatgcggtgaagctgggagtcaaacacagccagcag
atcattctgaccatccaacagatggtgcgagagcgtaaagtcaccaagcggactccgatc
aaggtcttcacagctccgactgacatagtggagcatgctcggcaattagcttctgagagg
atctacgctgttttcactgattacactcacgataagatttcaagagatgaagccatcaac
aaaattcgactagaaactgaagagaacctaaaagaaaaattcccacaggctgagcccttt
gatgtcatcgagtccttcaacacagtgagcaaagatgtcttccgcagtttagtgcttaat
gaatacaagagatgtgatgggagggagctgacgtctttaaggaacatttcctgtgatgtt
gacctctttaaaccgctgcatggctcagctctgtttcagagaggacaaacacaggtgctg
tccagtgtcacatttgattctctggaatccagtgttaaagcagacccaatcaccgcagct
ttgagtggcatcaaagacaaaaacttcatgcttcattatgaattccctccatatgcaacc
aatgagattgggaagatgggaggcatcaacaggagagagcttggacatggggccctggct
gagaaagctctgagaccagtcattcctaaagacttccctttcactattagggtcaccgct
gaggtgctggagtcaaacggatcctcctcaatggcttcagcgtgtggaggcagccttgca
ctgatggatgcaggtgtgcccatctcttctcctgttgcaggtgtagcagtgggcctcatc
tccaaggctgttccagggaaacctgatgagatccaagactacagattactaactgatatt
ctgggaatagaggattacctcggagacatggacttcaaattagcaggaacaaacaagggc
atcactgcgttacaggctgacgtaaagatcccaggtttgcctctgaaggtggtcatggag
gccatccaacaggccactgtggcaaaaagggaaattttgggcatcatgaacaaatgtatc
gcaagccccagagggactaggaaggagaatggacctgttgttgaaaatgtccgggtgcct
gtttccaagcgagcactctttgtgggtccaggaggctataaccttcgcagactacaagca
caaacgggtgtgacaattagtcaggtggacgaggagactttctctgtgttcgctccaacg
ccgggagccatggctgaagcccaagaactcatcactgacatctgcaaagatgatcaagaa
cagcagctggagtttggtgctgtctacactgccaccatcactgagataagagacattggt
gtgatggtaaaactttatcccaacatgagcgctgtcctgctgcacaactcacaactggac
cacaaacggatcaaacatccaagtgctttgggtttagaggtgggacagcagatacaggtc
aagtactttggacgggacccaacagacggaagaatgagactttcacggaaggtgcttcag
tcccctgcggcgacactcgtcaagacaatgagtgagaaacagagcatttccatgggttca
agcaacagccacacggacagcactggtttgtga
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