Acanthopagrus latus (yellowfin seabream): 119033393
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Entry
119033393 CDS
T08233
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alat03009
]
119033393 (rrp12)
Ribosome biogenesis [BR:
alat03009
]
Eukaryotic type
90S particles
Other 90S particles
119033393 (rrp12)
Pre-60S particles
Other pre-60S particles
119033393 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
119033393
NCBI-ProteinID:
XP_036979308
LinkDB
All DBs
Position
15:7453817..7464380
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AA seq
1289 aa
AA seq
DB search
MVKSGKLRSGTGSKLKRWKKGHSSDSNPQTSRFRQAAKSRYFSRPSEKSDLTVDALKLHN
ELQAGPLEIAASRKDACMEEDAGEAFSDRTSGTFLSGLSDCSNLTFRKVQRYWESNSAAH
KEICAVLAAVTEVIRGQGGKETETEYFAALMTTLEVVDSAESQAAVAYLLNLVMKRVPTP
VLMSKFSDTTKALMDVMSKQATSDTASALRWILSCLATLLRKQDVSVWTYPTTLQAYHGL
LSFTVHSRPKVRKAAQQGVCSILRGSDFLFTDNAPTHHPAAVTTAKFCMKEMEQAGGSKE
DTTTLHVLGLLKELMGTFPLGSVKSCCETLLRVMTLSHVLVTASAMQAFHRLFSGKPNAS
TLSPELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHVHLSGLQSSLSLGHLPRLFSAA
MSCLLSPHTQVVSAAANTLKTLLTECVAPHMEEMGMITATASAGNPSYVCKMFRIVEEGL
SYRFHASWPFVLQVLGCFYRVAGKRAHPIMTKSLQSLADLRTTPHFPFSGELDLAVGGAV
ESMGPEVVLGAVPLNITGYEDDLEFPRSWLIPVIRDHVKNTHLGFFTTYFLPLASTLKQR
AEELEQAGQKLEAKVYQTLQLQIWTMLPGFCTCPVDLLASFKGIARVLGMAINERADLRL
IVCQALRTIINKSCSTEEEKAEMGRFAKNFLPIFFNVYSLQPAAGESGTYRMAILDTIKV
YLTVTPTEMVCTFLQKATDRLSSTDSNEFTRLSMMDLVVAMAPSVDEATMTKTFELIKPY
LETKDPGMQKKAYRVLEEMCGGERDECRAFVVANLETLKVVLLETLKNASSPAKRPRLKC
LIHIVKRLGEEHKDFITALLPEVIICTKEVSVGARKNAYSLLVEIGNAFIRFCGNTKDAL
EQYMILVYAGLTGSVTMITCTVLALTRLVFEYKDAIDVTTREQLLHNICLLLSSRTREIV
KASLGFIKVILFIMDAKTLASHVTVMMEGVGSIKDDVRRHFRTKLKNIFTKFIRKFGFEL
VKSMLPAEHHKVLANIRKAEARTKRRKQAPEQHEDSESDQEAPKAKSQSIEDILAESDSD
LSEDEGKGGKAQKKAGKPQKGRAWLKEGEEDDPLNFLDSKVSQRVLATNPAMKKSAKVEH
GFKVTSDGRLIIREDGEEDVKDKDGGEMKDILEEAGVKSKKTQKRKFRDDNFDEDMDIEP
QLKYKAGGSGIHRPLGGRDDMGAEYKSKKGKGDVKKQGKLDPYAYIPLKKDQLNRRKRAK
LQGQFKGMVRGAQKGALSGRKMQKRKGKA
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcggggaaacttcgctccgggaccgggtccaaactcaagcggtggaagaaa
ggtcacagcagcgactcgaacccgcagacgagtcggtttcggcaggccgctaaaagccgc
tacttcagcagaccctccgaaaagagtgatctcacagttgatgcccttaagctgcacaat
gagctgcaggcaggtccgctggagatcgcagccagtcgtaaagatgcctgtatggaagag
gatgcaggtgaggcgttttcagacaggacctctggtacctttctcagcgggctgtcggac
tgctccaacctgaccttcaggaaggtgcagcggtactgggagtccaactcagctgctcac
aaagagatctgtgcagtgttggcagctgttactgaggtgatccgtggtcaaggagggaag
gagactgaaacagaatactttgctgctttgatgaccaccctggaggttgtggattcagca
gagtcgcaggctgcagtggcgtacctcctcaacctcgtcatgaaacgggttcctactccc
gtgctcatgtccaagttctcggacaccaccaaagctcttatggacgtcatgtccaaacag
gccacgtccgacactgcatcagctctcagatggatcctgtcatgtctggccactttgttg
aggaagcaggatgtgtctgtctggacttacccgaccactcttcaggcgtaccacggcctt
ctcagcttcacagtgcacagcaggcccaaggtccgtaaggcagctcagcaaggtgtgtgc
tccatcctcagaggaagtgacttcctgttcacagataatgcaccaacccatcacccagct
gcagtgaccacagccaagttctgcatgaaagaaatggagcaagcaggaggcagcaaagag
gacaccaccacgctgcacgtgctgggcctcctaaaggagctgatggggacgtttcctctg
ggatctgtcaagtcgtgttgcgagactctgctgcgagtgatgacactcagccacgtgctg
gtgactgcgagtgccatgcaggcttttcatcggctgttcagcgggaagccaaatgcttcg
accctctcaccagaactcaacgcacagatcatcacggctctgtatgactacctgcccagt
gagaacgacctgcagcctctcctggcctggctcgccgtcatggagaaagcacacgttcat
ttgtcaggcttgcagagttctctgagcttgggtcacctccctcgcctcttctctgccgcc
atgtcctgcctgttgtcgcctcacacacaagtggtttctgcagctgccaacacactaaag
actttgttgactgaatgtgtcgcccctcacatggaggaaatgggcatgatcactgccaca
gcctcggcagggaacccctcctatgtctgcaaaatgtttcgcatcgtagaagaaggactg
tcctatcgcttccatgcctcctggccattcgtgctgcaggtcctgggatgtttctatcgc
gtcgcggggaaacgagctcaccccatcatgaccaagtccctgcagtctctggcagacctg
cgcaccacccctcacttccccttcagtggcgagttggacctggctgtaggtggagctgta
gagagcatggggcctgaggttgtgctgggcgccgtgcctctgaacatcaccggctacgag
gatgacttggagttcccacgcagctggctgatcccggtcatacgggatcatgtgaagaac
acacacctcggtttcttcacaacatatttccttcctctggcctctacgctcaagcagaga
gctgaggagttggagcaagcaggacagaaacttgaggccaaagtttaccagactctacag
ctacagatctggaccatgctccccggcttctgcacatgtcccgtggacctgctggcatcc
ttcaaaggcatcgctcgcgtcctcggcatggctatcaacgaacgtgccgacctgagactc
atcgtatgccaggctctgcgcaccatcatcaacaagagctgctctactgaggaagaaaag
gcagaaatgggtcgcttcgccaagaacttcctgcccatcttcttcaacgtgtacagcctg
cagcctgcagctggagagtctggcacctacaggatggctatactggacaccatcaaggtc
tacctaactgtcaccccaacagagatggtgtgcacattcctgcagaaagccacagacaga
ctgagcagcacagacagcaatgagtttacacggctgtcgatgatggacctcgtggtcgcc
atggctccctctgtggacgaggccaccatgacgaaaacctttgagctgatcaagccatac
ttggagaccaaggatccaggcatgcagaagaaggcgtatcgtgtgctggaggagatgtgc
ggaggagagagggacgagtgcagggcgtttgtcgtggccaatctggaaacactcaaagta
gtcctgctcgagactctgaaaaacgcatcttcgccagcaaagaggccgagactgaagtgt
ctgatccacattgtgaaacggctcggcgaagaacacaaggactttatcaccgctctgctg
ccagaggtcattatttgtaccaaggaggtgtcggtcggagctcgtaagaatgcctacagt
ctgctggtggaaataggaaacgccttcatccgattctgtgggaacacaaaagatgccttg
gagcagtatatgattctggtgtacgcaggactcacaggctccgtcaccatgatcacctgc
acggtgttggcgctgactcgactggtgttcgagtataaagacgccatcgacgtgaccacc
agagagcagctgctgcacaacatttgtctgctgctgtcgtctcgtaccagagagatcgtc
aaagcctctttgggcttcatcaaggtcatcctcttcatcatggacgccaagacgctagcg
tcacatgtcaccgtcatgatggagggcgttgggagcatcaaagacgacgtgaggaggcac
ttcagaaccaaactgaagaacatcttcactaagttcatcaggaagtttggttttgagctg
gtgaagagcatgctgcctgcagaacaccacaaagtgctcgccaacatccgcaaggccgag
gctcgcaccaagaggcggaaacaggccccagagcagcacgaagattcagagagcgaccaa
gaggcgcctaaagcgaagagccagagtattgaggacatcctcgcggagtccgacagtgat
ttgtccgaggatgaaggaaagggcggcaaggctcagaagaaggcaggcaaaccgcagaaa
ggacgggcctggctcaaagaaggagaggaagatgacccgctcaacttcctggattccaag
gtttcccagagagtgctagccaccaacccggcaatgaaaaagagtgccaaggtggagcac
ggcttcaaggtgacatcagacgggcggctgatcatcagagaggatggcgaggaggacgtg
aaagacaaggatgggggagagatgaaagatatcctagaagaggctggagtcaagagtaaa
aagacacagaagaggaagttccgtgatgacaactttgacgaggacatggacattgaacca
cagctaaaatataaagctggaggctcaggtatccacagaccgcttggaggaagggacgac
atgggggcagagtacaagtcaaagaaaggaaaaggagatgtgaagaaacaagggaagctc
gatccctacgcctacatccctctgaagaaggaccagctcaaccgcaggaagcgtgccaaa
ctgcagggccagttcaagggcatggtgagaggagcccagaagggggcgctgtctgggagg
aaaatgcagaagagaaaggggaaagcctga
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