Acanthopagrus latus (yellowfin seabream): 119033472
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Entry
119033472 CDS
T08233
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119033472 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119033472 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119033472 (nfkb2)
Transcription factors [BR:
alat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
119033472 (nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
119033472
NCBI-ProteinID:
XP_036979508
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All DBs
Position
15:28396795..28412940
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AA seq
955 aa
AA seq
DB search
MLMRLSLLAPHWLLRSEGAVPPLGGVRQLRSGLSQTDSEAERDRKSSDEPETTRKTERRV
KRKMTEAQFINTYDSDLQMNLMQYDYIPPVDIKMEPYIPETAHGPYIQIIEEPKQRGFRF
RYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHSDPPRVHAHSLVGRH
CTENGTCTLDIGPNDLTASFSNLGILHVTKKGVVEVLSRRLREERKRQKGAHYHLTDSEE
SSILKEAKELGKVMDLNIVRLKFTAFLQDSNGGFTRALKPVVSNPIYDSKSPNASNLKIS
RMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAIVFK
TPPYHSAEIERPVTVFLQLKRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLPHYEPWR
GGGGGGRGGGAGGFGGAAGGGGGGFQFNQQMNGGGGGGAGGGGVFFTGGFTGFGGGAQMS
GSAPQSGVTQQQPGGQTGSPLQQQLFHLAATLHSKASQSARQTAAALLQYCSTGDTRVLL
AIQRHLCGVQDGNGDTPLHLAIIHQQTGVIQQLIHTLLNSQQQNILNTANHLRQTPLHLA
VITRQVKVVELLLRAGADPSLLDKDGRSPIHLAALAGDNTSLRPLLAHLGERHAHLVNTP
DYHGLHPLHLAVRRDGERCLRLLVEGGAKINAPEQKSGNTALHLAVRENLFKVACTLITE
LKADVNACTFGGNTPLHLAASLGSPTLCSMLVAAGADKNVENDEPLFFSSSSDEEQDEDE
PIREEGPSQPINPRKRPAGGHTPLDLAKCQKVRNLLNSRQSPKSSRHSSKKMKPSSSEEV
EASGLDEDTLSRLVEVLSVGDVPWKKLAEKLGMMTLTHLYLDSPTPCQQLLQHYKLGGGP
VQGLVEALQSLGLTEGVRLLRHTELQDDKHSTDTTVDSGFGSQPMEDEEPPVANQ
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgaggctgtctctgctggctcctcattggctgctgcggtcagagggggcagtc
cccccactggggggtgtgagacaactccgatcaggtttgagtcagactgacagcgaggct
gagagagacaggaagtccagtgacgaaccagaaaccaccagaaagacagaaagacgagtg
aagaggaagatgactgaggctcagttcatcaacacctacgacagcgacctgcagatgaat
ctgatgcagtatgactacattcctccagtggacataaagatggaaccctacatacctgag
acagctcacggcccgtacattcagatcatcgaggagcccaaacagaggggctttcgtttc
cgttatgagtgtgagggtccgtcccacggcgggctccccggggcctccagcgagaagaac
cggaggacgtacccgacagtgaagatcaataactacgtgggtcacgcccgggtggaggtc
cagctggtgacgcactccgaccctcctcgtgttcacgctcacagtctggtcggacgtcac
tgcaccgaaaacggaacctgcacgctcgacatcggacccaacgacctcaccgcctccttc
agtaacctggggatcctccacgtcaccaagaaaggtgtggtggaggtgctgagccggcgg
ctgagggaggagaggaagaggcagaaaggagctcactaccacctgacagattcagaggaa
agctccatcctgaaggaggccaaggagctgggcaaggtgatggacctgaacatcgtccgc
ttaaagttcaccgccttcctgcaggacagcaacggaggattcaccagagcgctcaaaccc
gtcgtctccaacccgatctacgacagcaagtcgccgaacgcctccaacctgaagatctct
cggatggacaagacgtgtggctcggtgctcggaggagacgagatcttcctgctctgtgac
aaagtccagaaagacgacatcgagatcaggttctatgaggaggacgatgaaggaggctgg
gaggcgttcggagacttttcaccaactgacgttcacaaacagtacgccattgtgttcaaa
acgccgccctatcacagcgcagagatcgagcggcccgtcaccgtcttcctgcagctgaag
aggaaaaaggcgggcgacagcagcgaccccaaacagttcacctacatcccgcaggtccaa
gacaaagaggaggtgttgaggaagaagcagaagccgctgcctcactatgaaccctggaga
ggaggaggaggaggaggaagaggaggaggagccgggggatttggaggagcagcaggaggt
ggaggaggaggattccagttcaaccagcagatgaacggaggaggaggaggaggagcagga
ggaggaggagttttcttcacgggaggtttcacagggttcgggggaggggctcagatgtca
ggctccgcccctcagtcaggggttacccagcaacagccggggggacagacgggctcgcca
ctacaacagcagctgttccacctcgccgccaccctccacagtaaagcctcgcagagcgcc
cggcagaccgccgccgccctgctgcagtactgcagcactggagacaccagagtcctcctg
gcaatccagagacacctgtgtggcgtccaggacggaaacggagacactcctttgcacctg
gccatcatccaccagcagacaggtgtgatccagcagctgatccacactctgctcaacagc
cagcagcaaaacatcctcaacacagccaaccacctccgacagactccgctccacctggct
gtgatcacccggcaggtgaaggtggtggagttgctgctgagggcgggggccgaccccagc
ctgctggacaaagatggccgcagtcccatccacctggcagcactggctggagataacacc
tcactccgccccctgctagctcacctgggagaacgccacgcccacctggtcaacacgcct
gactaccacggtctccacccgctccacctggccgtgaggagggacggcgagcgctgcctc
cgtctgctggtggagggcggagccaaaatcaatgcaccagagcagaagagtggaaacacg
gcgctgcacctggctgtcagggaaaacctgttcaaggtggcgtgcacgctcatcacagag
ctgaaggcggacgtgaacgcgtgcacgtttggaggaaacactccgctgcacctggctgcc
agtctgggctcaccgacgctctgctccatgctcgtcgctgcaggtgctgataagaacgtg
gagaacgacgagccgcttttcttcagctcctcttcagacgaggagcaggacgaagacgaa
ccaatcagagaggagggcccctcacagccaatcaaccctcgcaaaagacctgcaggagga
cacacccccctggacctcgccaagtgccaaaaggtgaggaacctgttaaactccagacag
agtccaaagtcgagtcgtcacagcagcaagaagatgaagccgagcagctcagaagaggtg
gaggcctcggggctggacgaggacactctgtcccggctggtggaggtgttgagcgttgga
gacgttccctggaagaaactggcagagaagctgggaatgatgacgctgactcacctgtac
ctggacagtccgacgccgtgccaacagctgctgcagcactacaagctgggcggaggcccg
gtccagggtctggttgaagctcttcagtctctcggtctgacagaaggagtccgactgctg
agacacaccgagctacaagacgacaagcacagcacagacaccacggtggacagcggcttc
ggcagtcagccaatggaggatgaggagccgcctgtggccaatcagtga
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