Acanthopagrus latus (yellowfin seabream): 119033529
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Entry
119033529 CDS
T08233
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119033529 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119033529 (srfb)
Transcription factors [BR:
alat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
119033529 (srfb)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
119033529
NCBI-ProteinID:
XP_036979660
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All DBs
Position
15:12898098..12922722
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AA seq
598 aa
AA seq
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MLPSRVGSAPSGNGSASGRGTAGHGSGVLGGGIRPVLIRAGQALPGVSESAGAAGRQGER
DAVGMLGANGPGGPRGARPGNGAGVALQTAVQGNMVGLNTQVVLAHGTRFDPDREPAPMC
SGSDNDSDSGDDDDPVGSLGDSRRGVKREREMEAAVTGQEVGVAAGGYGMVPGGVAGAKP
GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYT
FATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSMDQRMSATGFEETDLTYQVSESESM
GDTKDTLKPTFTVAGLPGTTSSAQSTVPTTSTTMQVSSGPSFPITNYLAPVSAGGNVSAN
GTVLKTAGGSTGVMQLPSGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQALAAAP
QPQQGQQAVFRFPAAVSLTGAGVPQQLQAIQVHPNTQSTSNSDSSPEISHTSTNSTATVS
LPATIVTSSVPTSVAGHMMYPSPHTVMYASTPSLDGGLAVLNAFSQGTSAMQVSHAQGQD
TGAVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDAAQNSKND
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccgggtcgggtcggcaccatctggaaacgggtcagcttcaggcagaggt
accgcgggacacggttcgggggttctcggtggcgggatacgtcccgttttgatcagagca
gggcaagctttaccgggggtcagcgagagcgccggagccgccgggcgacagggggagaga
gacgccgtcgggatgctgggggctaacggtccaggtggtccgagaggggcaagaccgggg
aacggggccggcgtggctctacagaccgccgtccagggcaacatggtggggttaaacacc
caggtcgtgttggctcacggaaccaggttcgacccggacagggagcccgctcccatgtgc
agcggctcagataacgactcggactcgggggatgacgacgacccagtgggttcactcggg
gacagcaggagaggggtgaagcgggagagggagatggaagccgcggtgacggggcaggag
gtgggagtcgctgccggaggctacggcatggttcccggaggggtcgccggggcaaagccg
gggaagaagacacgtgggcgcgtcaagataaagatggaatttattgacaacaagttgaga
cgttacaccactttcagcaagaggaagacgggtatcatgaagaaggcctatgaactctct
accctgacaggaacccaggtcctgctgcttgtggccagtgaaacgggccacgtctacact
ttcgccacccgcaaactccaacccatgatcacaagtgaaacaggcaaagccctgatccaa
acatgcctcaactcaccggactcaccgccgcgctcggatccctctatggaccagcgcatg
agtgccacaggcttcgaggagacggacctcacctaccaggtgtctgagtcagagagtatg
ggtgacacaaaggatacactgaagccgacgttcacggtagccggcctaccaggcactacc
agcagcgcccagtccacggtacccaccacctccaccaccatgcaggtgagcagcggacct
tcgtttcccatcaccaactacctggcgcccgtctcggccggcggcaacgtcagcgccaac
ggcaccgtcctcaagaccgccggcggctccacaggggtcatgcagctgcccagcggcttc
accttcatgcctgcaggcactcctctcccccccggcacccccaccattcctctgagccag
ctgcagcagcactccctggccctccaggggcagcatggtcaggccctggccgccgcccca
cagcctcagcagggacagcaggctgtcttccgcttccctgctgctgtctctctcacagga
gcgggggttccccagcagctccaggctatccaggtccaccccaacacccagtccacctcc
aacagtgacagcagcccagagatctcccacacctccacaaactctactgcaacggtgagt
ctcccagcaaccattgtcacctcgtcagtgccaacatctgtggcgggtcacatgatgtac
cccagcccccacacagtgatgtacgcctccacgccgtccctggacggggggctagctgtg
ctcaacgccttctcccagggcacctcggccatgcaggtgtcccacgcacagggccaagac
acgggtgcagtccctcaggtgttcctcacagcaccaccaggcacggtgcagatccctgtc
tcagcggtgcagctacacccaatggtgattggccagcagtcgagcggcagcagcagtaac
ctgacggagctccaggtggtgaacctggacgcagcacagaactcgaagaacgactga
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