Acanthopagrus latus (yellowfin seabream): 119033551
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Entry
119033551 CDS
T08233
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119033551 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119033551 (herc4)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119033551 (herc4)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
HECT type E3
119033551 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119033551
NCBI-ProteinID:
XP_036979731
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All DBs
Position
15:13657722..13670631
Genome browser
AA seq
1047 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKQVCDVGCGHRHTAFLMEDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQIIVAVSCGQSHTLALNDKGQIFSWGLGSDGQLGLNN
FEECVRVPRNIKSLSDVQIAQVACGYWHSHALSRGGQIFSWGQNRYGQLGLGINGQSIST
PQIIQSLQGIPFAQISAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKSLR
SQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHYSTNHEINPRKVFELMGNVVTQIS
CGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKGHFVALTATTDSDLEQGC
CVTRIYAGGDQSFAHYFTADKLQNIHNVKINNSHRKICTLNEDIIQQWLSHSPGRLPQEI
SNEIDLVFSSASCLNGSFLSTSHPDHYSTSSKCSGVDMNMARLLFHRVVQQDHPEITQQI
AASLEKHLLPRLSNSPPDIEALRLYLTLPECPLLSDRNNYVTITIPFAKSVISLKEPPLK
VLGNWWATFEPRVFQRLVELYKEVVVYLLRMHKVGIPSEEQRIFTCFLDTSLRFLEILHT
VSERAGHIIQYDKFYIHELDELIDIRNDYVTWIQRQMYPLGHDGVVTLCRYPFVFDAQAK
TTLLQTDAVIQMQMAVDQAQMQNFSSMFMPAVESVNPCLILIVRRENIVGDTMEVLRKSK
NVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPKYGMFRYYEESRLIWFSNKTFE
DIDLFNLIGVICGLAIYNLTIVELHFPVALYKKLLKRKPTLDDLKELMPDVGRSLQMLLD
YTEDDLEETFCLNFTITEENYGATEVFELVPNGEDINVNKSNRQEFVSAYVDYVFNTSVA
PLFECFYAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWTELQKSTEYKGEYWTDHPTIR
LFWEVFHDLPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGEHYLPVAHTCFNLLD
LPKYTSRETLREKLLQAIDHNQGFNLA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggaaatgcatcctacggacagctaggcttgggtgggattgatgaagag
atcgtggttgagccacggaaatgtgaattcttccacgggaagcaagtgtgcgatgtgggg
tgtggccacagacacacagccttcctgatggaggatgggacggtgtacacctgtggctgc
aatgacctggggcagctgggacacgagaagtccagaaagaaaccagaacaggttgtggct
ctggatgcacagatcatagtggcagtgtcatgtggacagtcccacaccctcgccttgaat
gacaaagggcagattttctcatggggtctaggctcagatgggcagctgggcctaaataac
tttgaagaatgtgttcgtgtgcctagaaacatcaagagtttgtcagatgtacaaattgct
caggtagcctgcgggtattggcactcccatgcactttcaagaggaggccagatcttctcc
tggggccagaatcgatatggacaacttgggctgggaataaatggacaaagtatttccacc
ccccaaatcattcagtctctgcagggcattccatttgcccagatatctgcaggtggcgcc
cacagctttgccctcacactctcaggagcggtgtttggctgggggcgcaacaagtttggt
cagctgggtctcaatgacaccaatgatcggtgtttcccagccctgctgaagtcccttaga
tcgcagagagtgatatacatctcctgtggagaagatcacacagcagcactaaccaaggaa
ggaggagtgtttacatttggagcaggaggatacggacaacttggacattactctacaaac
catgaaatcaaccccaggaaagtgtttgagctcatgggaaatgtagttacacagatttca
tgcggaaggcagcacacgttggctttcacaccctcctctggaaagatgtactcttttggg
ctcggtggtaacgggcagcttggtactcgctccacttgcaacagaaaaagccctgccccg
gtcaaaggccacttcgtagcactcactgctacaacagattcagacttggagcagggctgt
tgtgtcacaaggatttatgctggaggagaccagagctttgcacactatttcactgccgat
aaactccagaacatacacaacgtgaagataaacaattcccacagaaagatttgcacctta
aatgaggacatcatacaacagtggttgagtcattcgccaggaagactcccgcaagaaatc
tctaatgagattgacctcgtgttctcctcagcaagctgcctcaatggatcatttctgtca
acgagtcatccagatcactacagtaccagcagcaaatgttcaggggtggatatgaacatg
gctcgcctcctgtttcacagagtggtccaacaagatcaccctgagatcactcagcagatt
gctgccagtctggagaaacatctacttcccagactaagcaactctccgccagacatcgaa
gccctgagactctacctcactcttccagaatgccctcttctcagtgaccgaaataattat
gtcaccatcaccatccctttcgccaaatcggtcatcagcttgaaagagcctccactgaag
gtgctaggaaactggtgggctacatttgagcccagagtcttccagcggctggtcgagttg
tacaaggaagtggtggtgtatctgcttcggatgcacaaagtgggcattccctcagaagag
cagagaattttcacctgtttcctggacacgtccctccgattcctggagatcctgcacacg
gtgagcgagagagcaggacacatcattcagtatgataaattctacatccatgagttggac
gagttgatagacatcagaaatgattacgtcacatggattcagaggcagatgtacccactg
ggtcatgatggtgtcgtgactctgtgcaggtatccctttgtatttgatgcacaagcgaaa
acaacgctccttcagactgacgccgtcatacagatgcagatggcagtggaccaggcacag
atgcaaaacttcagctccatgttcatgccagcagtggaatcagtcaacccgtgcctcatc
ctcatcgttaggagggaaaatattgtcggagacaccatggaagtcctcaggaagtctaag
aatgttgactacaagaaaccgctcaaggtgattttcgtgggagaagaggccgtcgatgca
ggaggcgtgagaaaggagttcttcctcctgatcatgaaagagctgctggatcccaaatat
gggatgttccgttactacgaggagtccagactcatctggttttcaaacaagacctttgaa
gacattgacttgttcaacctcatcggggtcatttgtggcctggccatctacaatctcact
atagtggagctccacttccctgtggccctttacaagaagcttctgaagaggaagccgaca
ctagatgacctgaaagagctaatgccagatgtgggaaggagtctgcagatgttactggat
tacacagaagatgatcttgaggaaaccttctgcttgaacttcacaatcacggaggaaaac
tacggtgccacagaggtctttgaactagtacctaacggtgaagacatcaatgtcaataaa
tcaaacaggcaggaatttgtcagcgcatacgtagactacgttttcaacacgtcagtggcg
ccgctgtttgagtgcttctatgcaggctttcacaaggtgtgcggtggaaaggttcttgag
ctgtttcagcccaacgaactgcaagccatggtcattggcaacaccaactatgactggacg
gagctccaaaagagtactgaatacaaaggggagtactggacggaccatcccaccatcagg
ctcttctgggaggtgtttcacgatcttcctttggagaagaaaaaacagttcctgttgttc
ctcacaggaagtgaccgcatacccatcttgggcatgaaaagtctgaagctggtgatccag
cccactggtggaggggagcattacttacctgttgcccacacctgcttcaacctgctggac
ctgcccaagtacacgagtcgagaaacactccgtgagaagcttctccaggcgattgatcac
aatcaaggctttaatcttgcctga
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