Acanthopagrus latus (yellowfin seabream): 119033724
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Entry
119033724 CDS
T08233
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1 isoform X1
KO
K09335
visual system homeobox protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119033724 (vsx1)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
119033724 (vsx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119033724
NCBI-ProteinID:
XP_036980058
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Position
15:28580945..28585886
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AA seq
378 aa
AA seq
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MSGMTAREDVGEEKPKVKMLSPGFGIDKSRLHGSGFRSKGFAITDLLGLESDLQVRPQPG
APPGSGLSAAGSGPGPEPQGPGGGLGGFSFPGGSLPLGLGFLCSLAAQQPAGAPCFLPGH
LPLLQARADSHYLQNLEAQRDAYSDEECLSDRNDSKNSANSQKRKKRRHRTVFTSHQLEE
LEKAFHEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLY
GAMVRHSIPLPESILNSAKNGMMGSCAPWLLGEPHARMHKKSLEMSKKCSSPPESDSARS
DSFCEASERRGGSSEAREVHEVEQEEEELLEMEDEDMEEEVAIDLSSSSKQQQQEAGGSV
RSASSPRQQSGSESDEHS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatgacggctcgtgaggacgtcggagaagagaaacccaaagtgaagatgtta
tctcccggatttgggatcgataagtcccggctgcacggctccgggttccgatccaaaggc
ttcgccatcacagacctgctgggcctggagtccgacctgcaggtgcggccgcagcctggc
gctcctccgggttcgggcctgtcggctgcgggctccgggcccgggcccgagccgcagggg
cccggcggcggcctcggaggcttctcgttcccgggagggtcgctgccgctcggcctcggc
ttcctgtgcagcctcgcagcgcagcagcccgccggagctccgtgcttcctgcccggacac
ctgccgctgctgcaggcccgggccgacagccactacctgcagaacctggaggcccagcgg
gacgcatactccgatgaagagtgtctctcggaccgcaacgactcaaagaactccgccaac
tctcagaagaggaagaagcggagacaccggacggtgttcacctcccaccagctggaggag
ctggagaaggccttccacgaggcgcactacccggatgtctacgcccgggagatgcttgcc
atgaagacggagctgcccgaggacagaatacaggtgtggttccagaaccgtcgggcaaag
tggcgaaagcgtgagaagtgttggggccgcagcagcgtcatggcggagtacggtctgtac
ggggcgatggtgcgacactccatcccgctgccggagtccatcctcaactccgccaagaac
ggcatgatgggatcctgcgccccctggctgctcggtgagccgcatgcacgaatgcacaag
aagtctttggaaatgtccaaaaagtgttccagccctccggagtcggactcagcccgctcc
gactcgttctgcgaggcctcagagcgacgaggtggcagcagcgaggctcgagaggtgcac
gaggtggaacaggaggaggaggagctgctggagatggaggatgaggacatggaggaggaa
gtggccatcgacctgtccagctcctccaaacagcagcagcaggaggccggaggctcagtg
aggtccgcctcctcgccacggcagcagagcggcagcgagtcggacgaacacagctga
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