Acanthopagrus latus (yellowfin seabream): 119033783
Help
Entry
119033783 CDS
T08233
Symbol
nid1a
Name
(RefSeq) nidogen-1
KO
K06826
nidogen (entactin)
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119033783 (nid1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alat04990
]
119033783 (nid1a)
Domain-containing proteins not elsewhere classified [BR:
alat04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
119033783 (nid1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
Thyroglobulin_1
cEGF
EGF_CA
FXa_inhibition
EGF
SGL
Motif
Other DBs
NCBI-GeneID:
119033783
NCBI-ProteinID:
XP_036980214
LinkDB
All DBs
Position
15:complement(12236558..12253843)
Genome browser
AA seq
1189 aa
AA seq
DB search
MGWQERGWLVCASFLGFVASVESIRRGELFPFGPSARDRLMEAGNDQTHRLQLDNPVLFY
DGSFDSIFINTNGFVATAEPAGESTYLGKMPPGFGMIAALQGDLDTRDGEGRVYFRQDSS
RDALLRSAEIINGAFPEDDEFNPTHAVVITWVDVAAHEPHSRGDGNRKRNTFQLVIASME
TASFAIVLYPRDGIQFTSTPANGQSVVMHGGFSKGLVKGFLFSSQGPYFRTTTEDEASIR
ALAEETNSGQRGVWVYEIGTSPYFTNVAAGEVTDLPAEATRRPAYTDGQQVEYPHFESEG
AQIEVHPVQYQPHQPGNPEVVVVDDTDINVDVFSYNLGTCANNANKCSQFADCKDYSSGY
CCHCRPGFYGNGIQCVAEGKPQRMNGKVYGRVYVGNSPSPVEFTSNDLHSYVVVNDGRSY
VAISEVPYTLGPSLQPLSALGGVIGWAFALQQPGFKNGFSIIGGEFTRQAEVTFLPGNEK
LTIRQEFKGIDEHDHLVVSTTLEGRVPEVPRGSTVQIERYSEIYQYTNNLITSSSTRDYA
VNLPDGSIETRTYQWRQTITFQSCQHGNSLRDMKPTQMLSVDQVFVMYDANNELIRFAMS
NKIGDVNGGQPQENPCFTGRHGCDTNAVCRPGEGTQFNCECAAGFNGDGRTCYDIDECAD
TPQICGFHAICNNQPGTFRCECEDGYQFGSDGHTCTEIDRAVDACEDGTHDCDIPERAQC
SYTGGSSFICSCLPGYFGDGRVCQDIDECQPGRCHQDAVCYNTQGSFTCQCRSGYYGDGF
YCSAERTKTRCENHRDSLLGAGPRGPRPPVGQYIPTCDENGAYEPLQCHDSTGHCWCVER
NGQEIPGTRSGPGSRPMCIDHDGVPPPVGPTPRPDVHPLPPGTHLLFAQSGRIEHVPLEG
HDMKKEDAKAVLHLPEKVIIGVAYDCVEKMVYWTEITSPSISKASIQGGEPTEVIRSDLD
SPEGIAVDHLGRTLFWTDSVKDRIEVASLDGSQRRVIIDSDLVNPRAIITDPPNGNLYWT
DWNRDAPKIETSYMDGSNRRVLVKDDLGLPNGLTYDPQSSMLCWADAGTHKMECTHPARG
DRRQVMEGIQYPFGITSFGKNIYYTDWRRDAVVAVDRYAGKESDQFQPQKRTKLYGITTA
YAQCPSGQNYCAVNNGGCTHLCLATPAGRSCKCPDNAVGVGCVERDGGY
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgggttggcaggagcgaggatggctcgtctgtgcgagttttctcggatttgtggcgtcg
gtggagagcataaggcggggagagctttttcctttcggtccgagcgcaagagaccggtta
atggaagcagggaatgaccagacgcaccgactccaactggacaatccagtgttgttttat
gatggctccttcgacagcatctttatcaacaccaatggttttgttgccacagcggagcca
gccggcgagtcgacgtatcttggcaagatgcccccggggtttggcatgattgcagctctg
caaggagacctggacacaagagacggtgagggcagagtatacttccgtcaagactccagt
cgtgatgccctgcttcggtctgccgagatcatcaacggggctttccccgaagacgatgaa
ttcaacccaacccatgctgtggtgatcacctgggtcgatgtcgccgcccatgaacctcac
agcagaggagatggcaacaggaagagaaacaccttccagctggtaattgcatccatggag
acggcctcgtttgccatcgtcctgtacccgagggatggaatacagttcacctccacgcct
gcaaacggccagagtgtggtcatgcatggtggcttcagtaagggattggtcaagggtttc
ctcttttcaagtcagggaccatacttccgcaccaccaccgaagacgaggcatccatcaga
gctttggcagaggagaccaactctggccagcgcggagtgtgggtgtacgagattggaacg
tccccctattttaccaacgtggctgcaggtgaagtcactgacctgcccgctgaagccaca
aggagacctgcatatactgatggacagcaagtggaataccctcattttgagtcagagggg
gcgcaaattgaagtccacccagttcagtaccaaccccatcaaccagggaatccagaagtg
gttgtggtggatgacacagatataaatgtagacgtgttctcatacaaccttgggacgtgt
gccaacaacgctaataagtgctcccagtttgctgactgtaaggactactccagtggatac
tgctgccactgcaggcctggcttctatggcaacgggatacagtgtgtggcagagggaaag
ccacagaggatgaacggtaaagtgtatggaagagtgtacgtgggcaactctccttctccc
gtggagttcaccagcaacgatctccactcatacgtcgtggtaaacgacggccgctcctat
gtggccatcagtgaagtcccctacaccctcgggccctcgctgcagcctctgtcggccctt
ggtggcgtgattggttgggcgtttgctctgcagcagcctggcttcaagaacggcttcagc
attattgggggggagttcacacggcaggctgaggtgacctttctgccagggaatgagaag
ctgaccatcaggcaggagttcaaaggcatcgatgagcacgaccacctggtggtgagcacc
accctggaaggccgggtccccgaggtgcctcgcggctccactgtgcagattgagcgctac
tctgagatctatcagtacaccaacaacttgatcacctcatcctccacccgggactatgca
gtgaacctgcctgatggctccattgaaaccaggacgtatcagtggcgtcagaccatcacc
ttccagagctgccagcatggcaactctctgagagacatgaaaccgacccagatgctcagc
gtggaccaagtgtttgtcatgtatgatgctaataatgaactcatccggttcgccatgagc
aacaagatcggggatgtcaatggagggcagccccaggagaatccatgtttcactggaaga
cacggctgtgacaccaacgccgtgtgtcgacccggagagggaactcagttcaactgcgag
tgtgccgctggcttcaacggtgatgggcgcacatgttatgacattgacgagtgcgcagac
actcctcagatctgtggcttccacgccatctgcaacaaccagcccgggactttccgctgt
gaatgtgaggacgggtatcagtttggcagtgatggtcatacctgcactgagattgaccga
gctgtggacgcctgtgaagacggcactcatgactgtgacattcctgagcgcgctcagtgc
agctacactggaggctcgtccttcatctgctcctgcctgccggggtactttggagatgga
agagtctgccaagacatagatgagtgccagccaggcaggtgccatcaggacgctgtttgt
tataacacccagggatcatttacctgccagtgcaggtcaggttactatggcgacggcttc
tactgctctgcagagaggacaaaaacacgatgcgaaaaccacagagacagtctcctgggt
gctggcccacggggcccccgacctcccgtcgggcagtatatccctacatgtgatgagaat
ggtgcctatgagcccctgcagtgtcacgacagcacgggacactgctggtgcgtagaacga
aatggacaggaaattcccgggactcgctctgggcctggcagcagaccaatgtgtattgac
catgacggtgtgccaccacctgttggacccacccctcgacccgatgtccacccacttcct
ccaggaacacacctgttgtttgcccagagtggcaggatagagcacgtcccactggaaggt
catgacatgaaaaaggaggatgccaaggctgtcctccatctgccagagaaggtaatcatc
ggagtggcctatgactgtgtggagaagatggtctactggactgaaatcacatctccctcg
atcagcaaggcgagcattcaggggggagagcccactgaagtcattagatcagacttggac
agcccagagggtatcgccgtcgaccatttgggacgaactctgttctggacggactctgtg
aaggatcgcatcgaggtggcctctttggacgggtctcagcgtcgggtcatcatagactcg
gatcttgtcaacccccgtgctatcatcaccgaccctcccaacggcaatctatactggacc
gactggaaccgcgacgcccccaagatcgagacctcttacatggacggctccaacagaagg
gtgctggttaaagatgacctcggcctgccaaacggcctgacttacgaccctcagagctcg
atgctttgttgggcagatgcaggcactcataaaatggagtgcacgcatcctgcccggggt
gaccgcagacaggttatggaggggattcaatacccttttggaatcacgtcctttgggaag
aacatctactacactgactggaggagggatgcagtggttgctgtggaccgctatgctggc
aaggagtcagaccagttccagcctcagaaacggaccaagctatacgggatcactacagcc
tatgcccagtgtccttcaggacaaaactactgtgctgtgaacaacgggggctgcacccat
ctctgtttagcaacccctgccggtcgctcctgcaaatgtcccgacaacgctgtgggcgtg
ggctgtgtggagagagacggcggctactga
DBGET
integrated database retrieval system
