Acanthopagrus latus (yellowfin seabream): 119033819
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Entry
119033819 CDS
T08233
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119033819 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119033819 (vps8)
Membrane trafficking [BR:
alat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119033819 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
WD40_CDC20-Fz
Clathrin
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
zf-RING_11
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-RING_5
Beta-prop_THOC3
zf-RING_2
ANAPC4_WD40
Beta-prop_WDR5
Beta-prop_EML_2
zf-C3HC4
zf-C3H2C3
Beta-prop_WDR3_1st
PHD_4
WDR55
Beta-prop_HPS5
zf-rbx1
EIF3I
Motif
Other DBs
NCBI-GeneID:
119033819
NCBI-ProteinID:
XP_036980274
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All DBs
Position
15:complement(17698765..17721913)
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AA seq
1403 aa
AA seq
DB search
MTDSPDARSLVSASSQLNLMEVDTIDDKEFDIPQVDTPPTLESILNELEDEEEPFVLEDT
CVLNTDNMDAHSCDTSSLASSDSGDPVHLKRKRRTVDLNPTVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITMSGVIAVGTSHGLALVFDTNQALRLCLGSKATGAEFGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTINDAHPPGTAILHVKFTDDPTLAVCNDSGGSV
FELAFRRVMGMRSCDSRCLFSGSKGEVCSIEPLHAPQDFRDHPITHYSLLAMASLTKILV
IGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVPVQKTVNPVLAFSKGDTVHFLLVKKEETG
TIHVIKQRQLHLSCDIISLSWINSRTLLLVDSHEKLQVVDRPSQEILETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYGGQIVYLGTKSAHIMALRNWRERIDCLL
KQEHFVEALSLAWSFHEGTAKAVVGLFGDPVKRKGVVSDKMVEIIFQFTEHALKKCPEQG
KIQVMEQHFHDVVPVLVDYCLLLQRPDLLFNQLYSRLVENTVAKGVFLESLESYIVADRL
GHLTTPIMKDLLAHYQSNGMMDSLERCIVHLDITSLDIQQVVQVCWDNQLYDAMIYVFNS
GMNDYITPMEKLFAVIGSPIREGRSLTEEEVIMGNKLLVYISCCLAGRAYPLGDIPEDLV
VQVKNQVYEFLIRLHSADSSDEEEVFPYIRTLLHFDTREFLNVLAMTFEDFKNDKQALEY
QQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCPDD
DSRHTERQQVLLELLHVGGVVQFNEERLLALAEKAKFYQICEFLYEKKHLYDKIIDCYLR
DPLRKGEIFSYIHNLLSMPGYSPEEKQTVKEKVLQNMQELVTLDPSKLADLVVFHFVEEV
QQIISEFQDDELLYKFLSCLLEPREVHHPGTMLLLEHDLHELLLDLLCRFAPQNLLSFLQ
TSQHYRLKEAIEITQKYHHNEATAYLLEKKGDTQGAFDVLLETLKEKLSVLTAESDREVE
EEESHDDEEKTDSESTLTGVKDSLNDIIALCHRSSPNLDQQQREVLWFPLLETMMNSQRQ
GKGLGAKHTFEVLKELTMKVLNCMSSFISLPAIIQQILQDPVYGTGKLAEIQGLILGMLD
TFTYEQTLLETTTSLLNHDLHWSLAHLRAAVTRGLHPRQDYCNICLQQYKRRQDSAEEII
VFSCGHLYHVQCLQQKDCGWAVAPELQQRWSCYKCSSSKGGRGGTSSEPKRGRSTSLAQT
RVTSVHHDAGAEADRKKVFVEATLDLHQEQSWDQLRCLYRGPSRLSILSELSHSNEKPGL
LITAQPGSENFQLKLSPPPLFEE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgacggactctccggacgcccgcagcttggtgtctgcttcctctcagctcaacctgatg
gaggtggacacgattgacgacaaggagtttgacattccccaagtggacacacctcccaca
ctggagagcatcctcaatgagctggaggatgaggaggaaccgtttgtgttggaggacacc
tgtgtgctcaacactgacaacatggacgctcactcctgtgacacctcgtctctggccagc
tcagacagtggagacccagtacacctcaaacgaaagaggaggacagtggatctgaatccg
acagttcatgggtctgttcttcgacacagtctgctgaaaggcatctctgcacagatcgtc
tctgctgctgacaaagttgatgctggactaccaactgctataacaatgtcaggtgtgatt
gctgtgggaacgtctcatggtctggccctggtctttgataccaaccaggctctacggctc
tgtctaggctcaaaggcaaccggggcagagtttggcgctgtctctgccctcagcatcaac
catgattgctcacgacttctgtgcggctttgccaaaggacagatcacaatgtgggatcta
gccaatgggaagcttctaagaactatcaatgatgcccaccctccagggacagctatactg
catgtgaagttcacagatgacccaactcttgcagtgtgcaatgacagtggaggatcagtt
ttcgagctggctttcaggagggtgatggggatgcggtcctgtgactcccggtgtctcttc
agtggttctaaaggggaggtctgctccattgaacctctacatgcccctcaagacttcaga
gaccatcccatcacgcactactcactgctggctatggcctctctcactaagattctggtc
attggactgaagccctcgctcaaagtctggatgacttttccctacagcaagtctgatccg
tccagtgttcctcagctggcctggcagtttgttccagtacagaagactgtaaacccggtc
ctggctttttccaaaggagacacagtacacttcctcctggtaaagaaggaggagacgggg
accatccatgtcattaaacaaagacagctccacctcagctgtgacatcatcagcctgagt
tggattaacagtaggaccctgctcctggtagacagccatgaaaagcttcaggtggtggac
cggcccagtcaggagattttggagactctggatttggagcaggtgcaactggtctataac
agccgacatttcaaatcgctggccactggagggaatgtctcccaggctctggctttagtg
ggagaaaaggcctgctaccagtcagtctcgagctacggaggacagattgtctatttgggc
accaagtcagctcacattatggctctacggaactggagagagcgtatagactgtctgctg
aagcaggagcattttgttgaggctctctctctggcctggtccttccatgaggggactgct
aaggctgtagttggcctttttggagatccagtgaaaaggaaaggagtggtcagtgacaag
atggtagagatcattttccagtttacagagcatgctttgaagaagtgtcctgaacaaggc
aagattcaagtgatggagcaacactttcacgatgtggttccagtcctggttgattactgc
ctgttgctacagaggcctgacctgctgtttaaccagctgtattctcggctcgtggagaac
acggttgctaagggcgtcttcctggagtcactggagtcatacattgtagctgaccgactt
ggtcaccttaccacaccaatcatgaaggaccttctggcccattaccaaagcaatggcatg
atggacagcctggagagatgcattgtccacctggatatcaccagtctggacatacaacag
gtggttcaagtgtgttgggacaaccagctctatgatgccatgatctacgttttcaacagt
ggaatgaatgactacatcacacctatggagaaactctttgctgtgattggttcaccaatt
agagaggggagaagtctaacagaagaggaggtgataatgggaaacaaacttctggtgtac
ataagctgctgtcttgctggaagggcatatccactgggagacatacctgaagaccttgtg
gttcaagtaaagaaccaggtgtatgagtttcttatccgtctccactcagccgactcatca
gatgaggaagaggtttttccatatattcgtactctcctccacttcgacacgcgggagttc
ctcaatgtccttgccatgacatttgaagactttaagaatgacaagcaggctcttgagtac
cagcagaggatagtggacatcttactacaggtgatggttgacaacccagactttacgcct
tcccaggtgggtgggctcttcacctttttggctcgccagttggccaaaccagacaacacg
cttttcgtgaacaggaagctctttgatcaggtgctggagttcctgtgttgcccagacgat
gactcccgacacactgagaggcagcaggttctgttggagctgctgcatgtcggtggtgtg
gtccagtttaatgaagaaaggctgctggctttggcggaaaaggccaagttctaccaaatc
tgtgagtttctctatgagaagaaacatctgtatgacaagataattgactgctacctgaga
gaccctctcagaaagggggagatcttcagctacatccacaatctgttgtccatgcctggc
tatagcccggaggagaaacaaacagtcaaggaaaaagtactgcaaaacatgcaggagctg
gtgacccttgaccccagtaagttagccgacttagtggtgtttcacttcgtagaagaggtg
cagcagatcatctctgagtttcaggatgacgagctgctctacaagtttctcagctgtctc
ctagagccacgagaggttcatcatccggggaccatgctcctactggaacatgacctccat
gagctcctgttggacttactgtgccgcttcgccccccagaacctgctgagcttcctccag
acctcccagcactacagattaaaggaggccatagaaataacacagaagtatcaccacaat
gaggctacagcttatctgctggagaagaagggagatactcaaggagcgtttgatgtcttg
ttagagacactgaaggagaaactgagtgtcctcactgctgagagtgacagagaagttgaa
gaagaagaaagccatgatgatgaggagaagactgacagtgaatccacgctgacaggagta
aaggattcactgaatgacatcattgccttgtgtcatcgaagctctccgaacctcgaccag
caacagagagaggtcctttggtttccacttctggagaccatgatgaattctcaaagacaa
gggaaaggacttggtgccaaacacacatttgaggtgctgaaggagctgacgatgaaggtt
ctcaactgtatgagcagcttcatttctcttcctgctatcatccaacaaattctacaggac
ccggtgtatgggacagggaagctggcagagattcagggtctcattctgggtatgctggac
acatttacctacgaacagactttacttgagacaaccaccagtcttctaaaccatgacctc
cactggtccctggctcacctacgggctgcagtcacaaggggactccacccccgacaggac
tactgtaatatttgtctccagcaatacaagaggaggcaggactctgctgaggagatcatt
gtgttcagctgtggccatctgtatcacgtccagtgtctgcagcagaaggactgcgggtgg
gctgttgccccagagttgcaacagcggtggagctgctacaagtgttcatccagcaaagga
ggaagaggcgggacttcttctgaaccaaaaagaggccgcagcacgtccttggcacagact
cgtgttacgtcagtgcatcatgatgcaggagcagaggctgacagaaagaaggtgtttgtt
gaggcaacattggaccttcaccaggaacagtcctgggatcagctacgctgtttataccga
ggaccatccaggctatccatcctttcagaactgtctcacagcaatgagaaaccaggactt
ctaattacagcccaaccaggatcagagaatttccaacttaaactctctcctccacctctg
tttgaagagtga
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integrated database retrieval system
