Acanthopagrus latus (yellowfin seabream): 119033834
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Entry
119033834 CDS
T08233
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119033834 (zswim8)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
119033834 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Ribosomal_L24e
Motif
Other DBs
NCBI-GeneID:
119033834
NCBI-ProteinID:
XP_036980290
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All DBs
Position
15:2063107..2102410
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AA seq
1961 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRIRAVKDPLQIGFHLSATVVSSQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIISWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPCRRLELAGQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLDGITYCSADKKSATFCWSRAVQLQRGAKAAAGGGGETSETVGVVRGESGAGDFKGRGS
GHSSQQEVAVRPKETILTKRKGLSVSGGGGMLVRLGGSVSLALEDGGGKCMYKGPGSSSG
GKLKLTQGGGKGASVGGPGGNGGLGGGKHAGAKRRTSSEDSSLEPDLAELSLDDGCSLAL
GAEASNTFEFLPPPPEMLPSPSPLLRDSRKYSSGSGGSKMFETKRVSQASATLPAAEHAP
PCFPPKETVVVVMDLPNAAEKEAELEVEPVQNRDEDVDSAGSNQPSTSTTTARSGTTEKA
AKPPQSNKEAASAGSATGGQANQAAEAAGGDAGEAVGEDDYQAYYLNVASEEGADRQLAD
NHQEEEPDIFAGMKPLDQEGRMEVLFACAEALHAHGYSNEACRLAVELARDLLANPPDLK
VEQPQTKGKKSKVSTSRQTQVATNTLSKAAFLLTVLSERLELHNLAFSTGMFSLELQRPP
ASTKALEVKLAYQESEVVALLKKIPLGLVEMSAIRERGEQLRDGNFCDYRPVLPLMLASF
IFDVLCTPVCAVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCE
GTRRVKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAAGSQRSP
SKHTATNHSGVSGATGGVSKHAPSSSSATSVAASSSSSSSAVALAGEELAHQAELNPVQN
NPAGENTAETREHVSDGPPPSSEQQNETAPFKLEATVPSRLALGARCGYSQRCWGSPVRQ
KKKHTGMASIDSSAPETTSDSSPTLSRRPLRGSWAATSWGRGQDSDSISSSSSDSLGSSS
SSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNS
STSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAM
EIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNE
IQRALVQCKEQDNVMLEKACIAVEEAAKGGGVYPEVLFEVAHQWYWLYEQSVGGGSGQLR
ETSGRCGANGGSGRRPPETSCVVLDTGANMESQGMAAVTASVTAAAVVPVISVGSTIYQS
HAMPGQAMAHPHSQGLHPYTTIQAHLPTVCTPQYLGHPLQHVPRPTVFPVSGAAYPQGMH
PAFIGAQYPFSVATGPQPPMAATAVTFPGVPVPSMTQIAVHPYHAETGLPLSTTVAVGSV
HAGPTIQAIQGASLPSLSSQPGSLVSTPFPAEDEQHNQPISQQGLHYLHSAYRVGMLALE
MLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGAAKGVLSPFVLQEII
MEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADYDDFVNIIRSARG
AFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atggaacttatgttcgccgagtgggaggatggggagaggttctccttcgaagactcggac
cggttcgaggaagactctctgtgctccttcatctcagaggcagagagtctctgtcaaaac
tggaggggatggaggaagcagtctgctggacccaactccccaactgtcaagattaaagat
ggccaggtgattcctctggtggagttgtcagcaaagcaggtagccttccacatcccattc
gaggtggtggagaaggtttatccccctgtcccagagcagctccagctccgcattgcctac
tggagctttcccgagaatgaggaggacatcaggttatattcctgcctggcgaatggaagt
ccagatgaatttcaacgtggagagcagctatacaggatcagagctgtcaaagaccccctg
cagattggcttccatcttagtgctacagtggtgtccagtcaggccggtcagtctaaagga
gcttacaatgtggcggtcatgtttgatcgctgccgcatcacttcctgcagctgcacctgt
ggcgccggagccaaatggtgtgctcatgtggtggccctctgcctctttaggatccataat
gcatcagcagtgtgtctgagggctccagtctccgagtctctgtcacggctgcagagggac
cagctccaaaagtttgctcagtacttaatcagtgagctgcctcagcagatcctaccaaca
gctcagcgactgctggatgagctgctgtcatctcagtctactgccatcaacactgtgtgt
ggagctccagaccccacagcaggcccttcagcatctgaccagagcacctggtatttggat
gagtcgaccctcagtgacaacatcaaaaagactcttcacaagttctgtgggccttcacct
gtagtcttcagtgatgtaaactccatgtacctgtcgtccaccgagccgccagctgctgct
gaatgggcatgtctgctgcgacctttgaggggccgagagccagaaggtatctggaacctc
ctgtctattgttagggagatgttcaagagacgagacagcaacgcagccccactgcttgag
atcctcaccgagcagtgcctcacctacgaacagatcatcagctggtggtacagtgttcgg
acatccgcatcgcacagcagtgccagtggccacactgggcgcagcaatggccaatcagag
gtggcggctcacgcctgtgccagtatgtgcgatgagatggtggtgctatggcggctggca
gtgcttgaccccactatgagcccctgcaggcgtttggagctggcaggccagctaaagcag
tggcatctgaaagtaatagagatagtgaagcggggacagcatcgtaagtctctggataaa
ctcttccagggcttcaagcctgctgtagagtcctgctatttcaactgggaggtggcctac
ccactggatggcatcacctactgtagtgctgataagaagagtgccacattctgctggtcc
agggcagtgcagctccaaagaggagccaaagctgctgcaggagggggtggagaaacttct
gaaacagttggagtagtgcgaggggaaagtggagctggagattttaaaggaagaggaagt
gggcactcttcccaacaggaggtggcagtgagacccaaggagaccatactgaccaagagg
aaaggtctgtcagtgagtggtggcggagggatgctggtccgtctgggagggagcgtctct
ctggccttggaagatggaggagggaagtgcatgtacaaaggaccaggctcctcctctgga
ggcaagctgaaactgacacagggaggtggaaagggggcatctgtaggaggtcctggagga
aatggagggttaggaggtggtaagcatgctggtgccaagagaagaaccagcagtgaggac
agctccctggagccagacctggctgagctcagtctggatgacggctgcagtctagctctg
ggggctgaggccagcaacacttttgagtttctccccccaccccctgagatgctgccgtcc
ccgagtccactgcttagagactcacgcaagtacagcagtggcagcggagggagcaagatg
tttgaaacaaagcgtgtcagccaagcctcagcaacacttcctgcggcagagcatgctcca
ccttgcttccctcccaaagagactgtggtggttgttatggacttgccgaatgctgcagag
aaggaagcagagctggaggtggagcctgtccaaaacagagatgaagatgtagattcagct
ggcagtaaccagccttccacttccaccacaacagcaagatcaggtaccactgaaaaggct
gccaaaccaccacagagtaacaaagaggcagcatcagctggatcagctacaggtggacaa
gctaaccaggctgcagaagcagcaggtggagatgcgggagaggctgtaggtgaggatgac
taccaggcatactacttaaatgttgcctcggaggagggagcagacagacagcttgctgac
aaccaccaggaggaggagccagacatttttgcaggaatgaaacctctggatcaggagggg
cgcatggaggtgctatttgcatgtgcagaggctctccatgctcatggctacagtaatgag
gcatgtcggctggctgtggagctggccagagacctgttagccaaccctccagacctgaaa
gtggaacagccacagactaagggtaagaagagcaaggtgtcaaccagtcgtcagacgcag
gtagccactaacacgctgtcaaaagctgccttcctcctcactgttctcagtgaacgactg
gagctacacaaccttgccttcagcaccggcatgttctccttggaactccaaagaccgccg
gcatctaccaaagctctagaggtgaagctggcctaccaggagtcagaggtggtagctctg
ttgaagaagattccactgggcctggtggagatgtcggccatcagagagagaggcgagcag
ctccgagacggaaacttctgtgattacagacctgtgttgcctctcatgttggctagcttc
atctttgatgtactgtgtaccccagtttgtgcagttgtgtccccaacgggttcccgtcca
ccaagccgcaaccgtaacaatgagatgcctggtgacgaggagctgggctttgaggctgct
gttgctgcactcggtatgaagaccacagtcagtgaagcggagcatcctctgctgtgtgaa
ggaaccagacgagtgaaaggtgacctggccctggccctcatgatcacctacaaggatgac
cagagcaagctcaaaaagatactggacaaattgttggacagggagagtcaaacccacaag
ccccagaccctgagctccttctactccagcaagccagcagctggcagccagcgcagccca
tcaaagcatactgccaccaaccacagtggggtgagtggggccacaggcggcgtttccaaa
catgcaccctcatcttcatctgcaaccagcgtggcagcctcttcttccagctcttcctct
gctgtagcattggctggcgaggagttggctcatcaggctgaactgaacccggtgcagaac
aatccagcaggggagaacactgctgagaccagggagcatgtatcagatgggcctccacct
tcaagtgagcagcagaatgaaacagctccatttaaactggaggccacagtgcccagtcgg
ctggcactgggggcacgctgtggatatagccaacgctgctggggctcacctgtacgccag
aagaagaaacacactggcatggcgagtattgacagcagtgctccggagacaacctcagat
agctctcccaccctcagccgacggccactccggggcagctgggcagcaacatcttggggg
cggggccaggacagcgacagcattagcagttcatcgtctgattcactgggctcctcctcc
tccagcggatctcgcagggcagggggcggggccagggccaagagcaccgacaccagcagg
tacaaagggcgacgtccagagtgccatgcgccccacgtgcccaaccagccttcggaggca
gcagctcatttttactttgaactggccaagacggtgctgatcaaagctggaggaaactcc
tccacctccattttcacccagccctcagccagcgggggccaccaggggccccacagaaac
ctgcacctgtgtgcctttgagattggcctgtatgctcttggccttcacaactttgtctca
cccaactggctgtccaggacctactcttcccatgtgtcctggatcactggtcaggccatg
gagatcggcagcgctgccctaaacattctggtggaatgttgggatggtcacctcacccct
ccagaggtggcatccttggctgaccgagcgtctcgagcaagggaccccaacatggtgaga
gcggcggccgagctggccctgagctgcctgcctcacgctcatgccctcaatcctaatgag
atccagagagccctggtgcagtgcaaagagcaggacaatgtaatgctggagaaggcatgc
attgcagtagaggaagcagccaagggtggaggtgtttaccctgaggttctctttgaggtg
gctcaccagtggtactggctgtatgagcagtcagtgggcgggggctcaggccagctgcga
gagacctctgggcgctgcggggccaacgggggttcaggcaggaggcccccagagaccagc
tgtgtggtcctcgacactggagccaacatggagtctcaggggatggcagccgtcacagcc
tcagtcactgcagcagctgtcgtacctgtcatctctgtaggctccaccatttaccagtcc
cacgccatgccagggcaggccatggctcatccccacagccaaggcctccacccctacacc
accatccaggcccatctccccaccgtctgcaccccacagtacctgggacatcctctgcag
cacgtcccccgacccacagtcttccctgtgtctggagctgcatatccacagggaatgcac
ccagctttcattggtgcccagtacccattctcagtggccactggccctcagccccctatg
gcagccacagctgtgaccttccctggtgtccctgtaccgtccatgactcagatcgccgtc
catccttaccacgcagagaccggcctaccactgagcaccactgtagcagtaggcagtgtc
cacgcgggccccaccatccaggccatacagggagcatctctcccctccctgtcctcccag
cccggctcattggtcagcactccattcccagcagaggacgagcagcacaaccagccaatc
agtcaacagggcctgcactacctgcactctgcctacagagttggcatgttggcattggag
atgctgggcaggagggctcacaacgaccaccccaacaacttctccaggagcccaccatac
actgaggatgtcaaatggctgctgggacttgctgcaagactaggagtcaactatgtgtac
cagttctgtgtgggagcagcaaaaggtgtcctcagtccatttgtcctgcaggagatcatc
atggaggctctgcagaggctgaaccctgcccacatccacgcccacctccgaacacctgcg
ttccatcagctcgtccagcgctgccaacaggcctacctgcagtacattcaccatcggctc
atccacctgacccctgccgactacgatgactttgtcaacatcatccgcagtgctcgaggt
gctttctgcctgacccctgtgggtatgatgcagttcaatgacgtgctgcagaacctgaag
agagggaagcagaccaaggagctgtggcagcgcatctccctggagatggcaaccttctcc
ccctga
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integrated database retrieval system
