Acanthopagrus latus (yellowfin seabream): 119033878
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Entry
119033878 CDS
T08233
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119033878 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alat03009
]
119033878 (nvl)
Ribosome biogenesis [BR:
alat03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119033878 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_14
AAA_22
AAA_33
NPHP3_N
TIP49
Mg_chelatase
RNA_helicase
AAA_28
AAA_17
nSTAND3
Vps4_C
Rad17
AAA_18
NACHT
ABC_tran
TsaE
ATPase
AAA_3
Viral_helicase1
Zeta_toxin
IstB_IS21
Cytidylate_kin2
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
119033878
NCBI-ProteinID:
XP_036980353
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All DBs
Position
15:complement(2232508..2262005)
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AA seq
867 aa
AA seq
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MKNRSCGWVDCRLRQRVEQYLAASNREYVDLSAMALDLQKLYRMEYGRRNKTAFRIQVEK
VYEAITKESDLTDLESKHMAKRAKHNHADTGEGSSSSEESSESDDHILENTPANHMNSSL
TSLYRKGHPDSSTCSPGPDQLTTGSTASIANPTPSTGTLVSTGGWFIDKSRGPEKSNILI
DLCDEEPANAEANQTDVPLLEPEKSHKKAKKRMKSSTDITDSRTLNRKAKSKSPELQYPS
LKFEDVGGNEETLTDVCKLLIHMRHPEVYQQLGMAPPRGFLLHGPPGCGKTLLAQAVAGE
LQLPMLKVSAPELVSGVSGESEQKLRELFDLAVSSAPCILFIDEIDAITPKREVASKDME
RRIVAQLLTCMDDLNSLTVTAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAARL
RILKTLCRKLKLPEDFDYQQLARLTPGYVGADLMALCREAAMTAINRVLLETRGQSHSHS
QSSSKELLPSTDQTEADVMGKEIREQQTANINPGAEEESGQNQQQQGQLCHLLLLLKNTD
TLSEEELASLSILMSDFQSSLASVQPSAKREGFATVPDVTWDDVGALQDIREELTMAILA
PVHSPEQFRALGLSAPSGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES
ERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLLTEMDGLETRRQVF
IMAATNRPDIIDPAILRPGRLDKTLYVGLPPPADRHAILLTITKGGTKPPLEQDVCLEEI
ASDERCDCFSGADLTALIREASVNALRAFLKSQHSSASSFGHTDSSGSFADIRVSKQNFD
DAFKKVRPSVSKKDQKMYDLLRESLSR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagaagctgtggctgggtggactgtcggctcagacagagagtggaacagtat
ctggcagccagcaacagggaatatgtggacctttcagccatggccctggatcttcaaaaa
ctctacagaatggagtatggaagaagaaacaagacagcattcaggattcaagtagagaaa
gtgtatgaagccatcacaaaggagtctgaccttactgatctggagagcaaacacatggcc
aagagggccaagcacaaccatgctgacactggcgaaggcagcagtagttcagaggaatcc
tccgagagtgatgaccatattctggaaaacactcctgccaaccacatgaacagttctctg
acatctctgtaccggaaaggacacccagactccagcacctgctcacccggacctgatcag
ctcactaccggcagtactgctagcatagctaaccccactcccagcacagggacgcttgtg
tccacaggaggatggttcattgacaaaagcaggggccctgagaagagcaacatccttatc
gacctgtgtgacgaagagccagctaatgcagaggctaatcagacagacgtgcccttgctg
gagcctgagaaatctcacaagaaggcaaagaaaaggatgaagagctccactgacattact
gattctcgcacactgaacaggaaggcaaaatccaagtcgccagagctacagtatccctct
ttgaagtttgaagatgtgggaggtaatgaggaaacattaacggatgtgtgtaagctgctg
atccacatgcgtcacccagaggtgtaccagcagctgggaatggctcctccaaggggcttc
ctgctccatggccctcctggctgtggaaagaccctgctggcccaggctgtggctggggag
ctacagctgcccatgttgaaagtgtctgcccctgagctggtgtctggagtatctggggaa
tctgagcagaagctcagagaactgtttgacctggctgtgagctcagctccatgtatcctg
ttcatagatgagatagatgccatcacccctaagagagaggtggcctctaaagacatggag
cggaggattgtagcccagctgctaacctgcatggatgacttgaacagcctgacagtgaca
gcacaggtccttgtcattggtgccaccaacaggccggactccctggatcctgccctccgc
agagccggacgctttgacagagagatctgcctggggattcctgatgaggcagctcgtctc
aggatcttgaagacattgtgtcgaaagctgaagctgccggaggattttgactaccagcag
ctggccaggctcacaccaggctacgtgggtgcagaccttatggctctgtgccgtgaagct
gctatgaccgctataaacagggttttgctggaaacaagaggacagtcacacagccacagc
cagagctccagtaaagagctgctaccaagcacagatcagactgaagctgatgtgatggga
aaagagatcagagagcagcagacagcaaacatcaacccaggagctgaggaggagtcagga
cagaatcaacagcagcaggggcagctgtgtcacttgttgctcctgttgaagaacactgat
acactgtcagaggaagagttggccagcctgtccatcctcatgtcagacttccagtcctct
ctggccagtgtccaaccctcagccaagagggaaggcttcgccaccgtgcctgatgtcacc
tgggatgatgtgggagccctgcaggacatcagagaggagctcaccatggccatactggct
ccggtgcattctccagagcagttcagagctcttggcctcagtgctccatctggtgtgctg
ctggctggacctccaggatgtggaaaaacactgctggctaaggctgtggccaatgaatca
ggcctcaacttcatctctgtcaagggtccagagctgctcaacatgtatgtgggagagagt
gagcgggctgtcagacaggtcttccagagaggacgcaactcagctccttgtgtcatcttc
tttgatgagatcgatgctctgtgtcctcgccgctcaggccatgagtcaggagccagtgtg
cgggtggtcaaccagctgctcacagaaatggacggcctggagacgcgacgacaggtgttc
atcatggctgcaaccaacagaccagatattattgacccggccatactcaggccaggtcgt
ctagataaaaccttgtatgtgggtctgcctcctccagcagaccgccatgccattctgctc
accattactaagggcgggaccaaaccaccgctggagcaagatgtctgtctagaagagatc
gcctctgatgagcgttgtgattgtttcagtggtgccgacttgactgcattaataagggaa
gcatctgtgaatgccctgagggccttcctgaagtctcagcattcctcagcctcttccttt
ggtcacacagactcatctggctcctttgctgacatcagagtgagcaaacagaactttgat
gatgccttcaagaaagtccgtccatctgtgtctaaaaaggaccagaagatgtacgatctg
ctcagagagtccctcagcagatga
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