Acanthopagrus latus (yellowfin seabream): 119034327
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Entry
119034327 CDS
T08233
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03013
Nucleocytoplasmic transport
alat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119034327 (pnn)
03015 mRNA surveillance pathway
119034327 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119034327 (pnn)
03041 Spliceosome [BR:
alat03041
]
119034327 (pnn)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119034327 (pnn)
Spliceosome [BR:
alat03041
]
Complex C
Other components
EJC/TREX
119034327 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
119034327
NCBI-ProteinID:
XP_036981110
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All DBs
Position
16:21831469..21836750
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AA seq
693 aa
AA seq
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MAVVVRSLQDQLEKAKESLKSVDDNIRKLTGRDPNESRPGQIRRLGGPLAGPGGGGRGRG
INLLRRSLSDIGGGGPPAKQRDIEGALLRLAGDQRARRDARHDSDAEDDDDVKKPALQSS
VVATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRTEIEQ
KLEVQAEAERKKVETEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRT
KTKPHIFYLPGKMCSATQKLLDESTKKLNAVFEERCEAFAEHLSKMESRPRRQPNRDQDG
NMAATGMDRPTEGKPAGQVVKVTGNKGDVEMEEEEEEDDDEEEERERGREKEEREKEGDR
KVTEKDEGEERKGGEKVLKKVEEEVEGMELREEGSEEKKVGGEGGKDRGDREEKGKKDAS
PDSDEIEMEVGGGPEQDSKGVEGQTDSKQAPTDLQNQKSQDAQSSEPAETSQEAPESSQP
QISLTTEEPAVQPSGVLGLERIPGSQTAPRQDLIIPSLRDQDSAVQDPTVEGKPEDEAPQ
KQPDTQETPSITLATTKDGEDGGRGRKKDKESRKGRSHSNSSSSSSSGSSSSGSSSSSGS
SRSSSSSSSSSSSSSNSSSRSRSRDGKRKRRPSDRGRKKGEERSHRKRGGSSGGGRDSKG
SKERRKRRSDEGRGRSSRSDREHKDRDRKDKRR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtggtgcggagcttgcaagaccagctcgaaaaagctaaggaaagcttaaaa
agtgtggacgataatattcgtaaattaaccggacgtgatcctaatgaatccagaccgggt
cagatccgtcggctcggcggccccctggcaggccccggtggaggaggtagaggcagagga
atcaacctgctcaggcgtagtctctcagacattggaggcggcggcccccctgccaagcag
agggacattgaaggagccctgctgaggctggcgggggaccagagggccaggagagatgcg
cgtcacgacagcgacgccgaggatgatgacgatgtcaaaaagccggcgttgcagtcgtct
gtagtagctacctctaaggagagaacacgccgagacctcattcaagatcaaaccatggat
gagaggggcaaacagaggaatcggcgaatgttcggcctgctgatggggaccttgcagaag
ttcaaacaggagtcaaacgtctctacagagaagcaaaagcggcgtacagagatcgagcaa
aagctcgaggttcaggctgaggctgagagaaagaaggtggagactgaaaagagggagttg
tttgaagagaggagagccaaacagactgagctgagactgctggaacagaaagtagaattg
gctcagctgcaagaggagtggaccagccacaataaccgtctggtgaaatatatccgtacc
aaaaccaagcctcatatcttctacctgcctggaaagatgtgctctgccacacagaaactc
ctcgatgagtccaccaagaaactaaatgctgtatttgaggagaggtgcgaggcttttgct
gaacacctcagcaagatggagtcccgcccccggcgtcaaccaaaccgcgaccaggatggc
aacatggcagcaacaggaatggaccgtccgacggagggtaagcccgcaggtcaggtagtc
aaggtgacaggtaataagggggatgtagagatggaggaagaggaggaggaagatgatgat
gaagaggaggagagggagagagggcgggagaaggaggagagggagaaggagggggacaga
aaggtgacagagaaagatgagggggaggaaaggaagggaggggagaaggtgttgaagaag
gtggaggaagaggtagaggggatggagctgagggaggaggggagtgaggagaagaaagta
ggaggtgaggggggtaaagacagaggagacagggaggagaagggaaagaaggatgccagt
ccagactctgatgagattgaaatggaggtggggggtgggcctgagcaggacagtaaggga
gtagagggacaaacagacagtaaacaggcacccacagaccttcagaatcaaaagagccag
gatgcccagtcctccgaaccagctgaaaccagccaagaagcaccagaaagcagtcagccc
cagatcagcctcaccacagaggagccggcagttcagccctctggggttctgggcctggag
aggatcccagggtctcaaacagcccctaggcaggatttgatcatccctagcctcagggac
caggactcagcagttcaggacccgacagtggaaggaaaaccagaggacgaagctccccaa
aaacaacctgatacccaggagacccccagcatcacccttgcaaccactaaggatggagag
gacggtgggaggggaaggaagaaggacaaggagtcaaggaagggccgcagtcatagcaac
agctcctcctcttcctcctctggctcctcttccagtggaagctcctcctcctctggatcg
agtcgctcttcttcgtcgtcttcatcgtcttcgtcctcttcatccaacagcagcagccga
agtcgcagtcgagacggcaagcgcaagaggaggccgtcagataggggcaggaagaaagga
gaagagagaagtcaccgcaagagaggagggagtagcggtggagggagagactcaaaagga
tcaaaggagaggaggaagaggagaagtgatgaagggaggggcaggtcgtcccggagtgat
agggagcataaagatagagacaggaaggacaagaggcgctaa
DBGET
integrated database retrieval system
