Acanthopagrus latus (yellowfin seabream): 119034371
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Entry
119034371 CDS
T08233
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alat03400
]
119034371 (smc6)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
119034371 (smc6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
TMF_TATA_bd
AAA_29
FlaC_arch
CCDC113_CCDC96_CC
Med9
AAA_21
Motif
Other DBs
NCBI-GeneID:
119034371
NCBI-ProteinID:
XP_036981225
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All DBs
Position
16:complement(4831697..4848789)
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AA seq
1107 aa
AA seq
DB search
MRQFSESSPLVTCFKMSKRKGKAIGDATAVKSRRVTAVGIDDAADDTNHQRPSSGSFSLS
ATGDIGLIESVTLKNFMCHHLLGPFQFGPNVNFIVGNNGSGKSAILTALIVGLGGKATFT
NRGASLKDFVKTGENSADITVKLRNRGPDAYKWDVYGDSISIEQRIFCDGSRNCRLRNKA
GLLISNKKEELTAILDHFNVQLDNPVSILNQEMSKQFLHSKNESDKYKFFMKATLLEQMK
RDYIHIKHTKTVTRQQVERQEECLKDLKHEFLQKKERYDNLSSFSEMKAVLENLKKSMAW
CLVREKEQFVQQLKEDIEKEENNYKHQDNLQLCQTRVTQVEKKLQSVKSRFESLRDEQES
LSRDSHKLKEQMKTISKAHKEQELVYFRALNKLKQSEQEQDLLQEKINKAKTSVSLNSDV
ETEYAKQQKKISDLKEQLAELEKTCSQLNEEIKNKHQALFKGKEERDKLRLEERNIHVLC
ASKLKRKNQLLASRSNKLKRFGEHVPDLLDSIAEAYAKKRFLKKPVGPIGVCISLKDPTL
AVAIECCLRSFMKAFCCDNYKDEAVLQELMSRYYPKGSRPQIIVSPFSDKVYNIHGRKAH
HPDYPSVLDMITAANPVIINCLIDMRGIESILIIKEKDKARKVMQHGRPPKNCREAFTVE
GDQVFPNRYYTSEFSMAKYLGGDIETELSMLESDLENHQAQLSRFQLHVTSVSEQIVSME
SQLNSTIMTLKKTLASVNQIKASISELETAGEDQIDDISSLEEVAQEYRQKIEAEKQAVQ
EAKAELDKHQKMTEDVESEYASVRERVDQLPDHMEPLRDEQMKLETECMKHERNLKILEN
KLKSHEDNIQAMKSDLTQREEELQEYVAKASEISPERQQVTGSTKSIDTEITRLKKKLKV
YESSHGQHEQVVREYAEALSLYRQKTNQVRDLRRFIDRLDNIMSDRQNRYKVMRRSLSVR
CKLYFNNFLIKMNCCGSMVFDHNNETLSISVKPPGREEDGVSDMRSLSGGERSFSTVCFM
LSLWEITESPFRCLDEFDVYMDMHNRRICLDLLLELSERQHLRQFVFITPLTTSNLPKTR
LIKIHHLQDPERVRSEARDEDVRAELQ
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagttctcagaatcctctcctttggtgacttgtttcaagatgagtaagaggaaa
ggcaaagcgatcggtgatgcgacagctgtcaagagccgcagggtgacagctgtgggtatc
gacgacgcagcagatgatacgaaccatcagagaccctcctcaggcagcttctcgctctct
gccacaggagatatcggcctcatcgaaagcgtcactctaaagaacttcatgtgtcatcat
ttgctcggtccgttccagttcgggcccaacgtgaatttcatcgtcgggaacaatggaagt
ggaaaaagcgccatcctgactgctttgatcgtcggcctcggtggaaaggccacgttcaca
aacagaggggcgtcgctgaaggattttgtgaagaccggtgaaaattctgcagatataact
gttaagctgagaaacagaggaccagacgcttacaaatgggacgtctacggtgacagcatc
tcaatcgagcagaggatcttttgtgatggaagtcgaaactgcagactgaggaacaaagcc
ggcctccttatctccaacaagaaggaggagctgacggccattttggaccacttcaacgtc
cagttggataacccagtgtccatcctcaaccaagaaatgagtaaacagttcctacattca
aaaaacgaatcagacaagtacaagttcttcatgaaagcgactctgctggaacagatgaag
agagattacatccacatcaagcacactaaaacagtaacgaggcagcaggtggagagacaa
gaggagtgtctcaaggacctgaaacacgagtttctgcagaagaaggagaggtacgacaat
ctgtcgtccttcagtgagatgaaggcggtgctggagaatctgaagaaatcgatggcatgg
tgtttggtccgtgagaaggagcagtttgtgcagcagctgaaggaggacattgaaaaggaa
gagaataattacaaacatcaggacaaccttcagctgtgtcagaccagggtcacacaagta
gagaagaaacttcagagcgtcaaaagcagatttgagagtctgagagacgagcaggagtct
ctatcgagggacagtcacaagttgaaagaacaaatgaagaccatcagcaaagctcacaag
gaacaggagctcgtttatttccgggctctgaacaagctcaaacaatcagagcaggaacaa
gaccttctccaggagaaaattaacaaggcaaagacgagtgtgagtctcaacagcgacgtg
gagacagaatatgcgaaacagcagaagaaaatatctgatctgaaagagcagctcgcagag
ctcgagaaaacgtgctcgcagctgaacgaggagatcaagaacaagcatcaggcgctgttc
aaagggaaggaggagcgggacaagctgagactggaggagagaaacatccacgtcttgtgc
gcgtcgaaactgaagaggaagaatcagctcctggccagtcggtcaaacaagctgaagcgg
tttggggaacacgtgcccgacctgctggattcgatcgccgaggcgtatgccaaaaaacgc
ttcctcaagaaacctgttgggccgataggggtgtgtatcagtctgaaggatcccacgctg
gctgtagccatcgagtgctgcctgcggagcttcatgaaggctttctgctgtgacaactac
aaggacgaggcggtgctccaggagctgatgtctcgctactatccaaagggcagcaggccg
cagatcatcgtcagccctttctctgacaaagtttacaatattcacggacggaaagcgcat
catccagattacccgtcagtgctggacatgatcacggccgcaaacccggtgatcatcaac
tgcctgatcgatatgaggggcatagagtcgattctgatcatcaaagaaaaggacaaagcg
aggaaggtgatgcagcatggacgaccgcctaaaaactgccgggaagccttcaccgtggag
ggagatcaggtgtttccaaaccggtattacacctccgagttcagcatggccaaatatctc
ggcggggatatcgagactgaattaagtatgttggagtccgacctggagaatcaccaggct
cagctgtccaggtttcagctccacgtgacttctgtgtctgagcagatcgtcagcatggag
agccagctgaacagcaccatcatgaccctgaagaagacgctggcctccgtgaatcaaatc
aaggcgtcgatatccgagctggagacggctggtgaggaccaaattgatgacatcagctcc
ttggaggaagttgcccaagagtaccgacagaaaatagaggcagagaagcaggccgttcaa
gaggcgaaggcggagctcgacaagcatcagaagatgacagaggacgtggagtcggagtac
gcttctgttcgagagcgtgttgatcagcttcctgatcacatggagccactgagggatgag
cagatgaagctggagactgagtgcatgaaacacgagcgaaacctgaagattttagaaaac
aagctgaagagtcacgaagacaacatccaggctatgaagagtgacctcacccaaagagaa
gaagagctacaggaatatgtggccaaagcctcagagatcagccccgagcggcagcaggtg
accggcagcaccaagagcatcgacacggagatcactcggctgaagaagaaactcaaggtg
tacgagagcagccacggccagcacgagcaggtggtcagggagtacgccgaggccctctct
ctgtacagacagaaaaccaaccaagtgagagatctgcggaggttcatcgatcgactcgac
aacattatgtcagacaggcagaacagatacaaagtaatgcgcaggtcgctctccgtcaga
tgcaagttatacttcaataactttctgatcaagatgaactgctgcggctcgatggttttt
gatcacaacaacgaaacgctctcgatctcggtgaagcctccgggccgggaggaggacggc
gtgagcgacatgcggtcgctgtccggcggcgagcgctccttctccaccgtgtgcttcatg
ctctcgctgtgggagatcacagagtcgcccttcagatgcctcgatgagttcgacgtctac
atggatatgcataatcgcaggatctgtctggatctcctcctggagctgtcggagcggcag
cacctccgacagtttgtcttcatcactcctctcaccaccagtaatctgcctaaaacccgc
ctcatcaagatccaccacctccaggatccagagagagtccggagtgaagccagggacgaa
gacgtcagagccgagctgcagtga
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integrated database retrieval system
