Acanthopagrus latus (yellowfin seabream): 119034499
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Entry
119034499 CDS
T08233
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040
Spliceosome
alat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119034499 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119034499 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119034499 (srsf5a)
Spliceosome [BR:
alat03041
]
Common components
Common spliceosomal components
SR proteins
119034499 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CDC45
Motif
Other DBs
NCBI-GeneID:
119034499
NCBI-ProteinID:
XP_036981465
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All DBs
Position
16:complement(5723577..5729292)
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AA seq
299 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGYRPSRSSGSRPDRYGPPVRTDHR
LIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKNAISKLDGTEL
NGRKLKIFEDSRRSHSKSRSRSRSYSRSKSRSRSRNRSRSRSRSVSRTPERKSSGGGKAA
ARSPSRSKSRSKSRSKSRSRSRSRSPAPAENKQSRSRSRSRSRSRSRSRSRSASADSKH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgcgtcttcatcggccgcttgagcccacatgccagagagagagatgtg
gagaagtttttcaagggatatggaaggattcgggaaatcaacctgaagaatggattcggc
tttgtggaatttgatgaccacagagatgcagatgacgctgtgtacgagttgaatggaaag
gaactgtgcagtgaaagagtcacaattgagcacgctcgctccagaagaggaagaggtggc
ggtcctggaatgggacgttttggcggcggtggtggtggcggcggcggtggctatcgccca
tctcgcagcagtggatccagaccggacaggtatggccctcctgtgcggaccgaccataga
ctcatcgtagagaacctctcctcacggattagctggcaggacctgaaagacctgatgaga
aaagcaggtgaagttacctttgtggacgctcacagacccaacaaaaatgaaggagtggtt
gagtttgcatctcgaagtgacatgaagaatgccatttccaagctggatgggaccgaactg
aatggacgcaagctgaaaatctttgaggacagcagaaggagtcacagcaagagtcgctct
cgttcccgcagctactcccgctccaagagccgttccaggagccgcaaccgttccaggagc
cgctccaggtctgtcagtcgcactccagagaggaagtcatcaggagggggcaaggccgcc
gccagatctccctcaaggtccaagtctcgctccaagtcccgctcaaagtctcgctccagg
tctcgctcacgttcacctgctcccgctgagaacaaacagtcccgttcccgctctcgttct
cggtcccgctctcggtcccgttcacgttcccgctccgcctcagcagacagcaaacactga
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