Agromyces larvae: MTO99_02020
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Entry
MTO99_02020 CDS
T09195
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
alav
Agromyces larvae
Pathway
alav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTO99_02020 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alav03021
]
MTO99_02020 (rho)
03019 Messenger RNA biogenesis [BR:
alav03019
]
MTO99_02020 (rho)
Transcription machinery [BR:
alav03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MTO99_02020 (rho)
Messenger RNA biogenesis [BR:
alav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MTO99_02020 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
UOE44592
LinkDB
All DBs
Position
453608..455851
Genome browser
AA seq
747 aa
AA seq
DB search
MTNAPEHVEGALDSARLGTLKVAELQELAATLGIAGAAKRRKGELVELISAHQAAAAESG
AVESAEPAAAPAADAEAESASPESASPESASPESAAAVESALDEASAPSEPVAPTAEPTP
GDASEPDAPAAAAEPVADAPVAPARRGRQPRRATSASTAAAQHVNGAGAGVALVPAADES
RDEAREAARAAVREELAAATGEAPRRADAEQPETPSNDEPRQGGRNRRGRRGGNGGNGDR
EAQKSDNGQDAGRRQGDDRKVDDRKADDRKADDRKSDERKSDERKSDERKGDERRGDVET
DAERQGGRQNQSRDGQQPRDGQQAEGEGGRRSRYRDRKRRGQGGPTDEVEPEILDDDVLI
PIAGILDVLDNYAFVRTTGYLPGPSDVYVSLGQVKKYHLRKGDAVVGSIKQPRDGEQPGR
QKYNALVKIDSINGQTPDEAQTRVEFQKLTPLYPQDRLRLETEPTKLTQRIIDLVAPIGK
GQRGLIVAPPKAGKTIVLQQIANAISINNPEVHLMVVLVDERPEEVTDMERTVKGEVIAS
TFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRVLSGGVD
ASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLA
DKRIFPAVDVNASSTRREEMLLSPDEVKITWKLRRALAGLEPQQALEAVLGRLRETQSNT
EFLLLMQKSAPVGGNGHGGHAHESDHR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacgcacccgaacacgtcgagggagcgctcgattccgcgcgcctcggcaccctg
aaggtcgccgagctccaggagctcgccgccaccctcggcatcgccggcgccgcgaagcgc
cgaaaaggcgaactcgtcgagttgatctccgcgcaccaggccgccgccgccgaatccggt
gccgtcgagtcggccgagcccgccgccgcaccggccgcggatgccgaggccgagtcggcg
tcgcccgagtcggcctcgcccgagtcggcctcgcccgagtcggcggcagccgtcgaatcg
gcgctcgacgaggcatccgctccgtccgagccggtcgcaccgaccgccgaaccgacgccc
ggtgacgcctccgagcccgacgcgcccgccgcagcggccgagccggtggccgacgcaccc
gtcgcgccggcccgtcgcggccgtcagccgcgtcgcgccacgagcgcgtcgaccgccgcc
gcgcagcacgtgaacggcgccggagccggcgtcgcgctcgtgcccgcggccgacgagagc
cgcgacgaagcccgcgaggccgcgcgcgccgcagtgcgcgaagagctcgccgcggcgacc
ggcgaggcgccgcgtcgcgccgacgccgagcagcccgagacgccgtcgaacgacgagccg
cgccagggcggccgcaaccgtcgtggccgccgcggcggcaacggcggcaacggcgaccgc
gaagcgcagaagtccgacaacggtcaggacgccggccgtcgccagggcgacgaccgcaag
gtcgacgaccgcaaggcggatgaccgcaaggcggatgaccgcaagtccgacgagcgcaag
tccgacgagcgcaagtccgacgagcgcaagggcgacgagcgccgcggcgacgtcgagacc
gatgcggagcgccagggcggtcgccagaaccagtcccgcgacggccagcagccccgcgac
ggccagcaggccgagggcgagggcggccgccgcagccgctaccgcgaccgcaagcgccgc
ggtcagggcggcccgaccgacgaggtcgagcccgagatcctcgacgacgacgtgctcatc
ccgatcgcgggcatcctcgacgtcctcgacaactacgcgttcgtgcgcaccaccgggtac
ctgcccggcccgagcgacgtgtacgtctcgctcggccaggtgaagaagtaccacctgcgc
aagggcgacgcggtcgtcggctcgatcaagcagccgcgcgacggcgagcagcccggtcgg
cagaagtacaacgcgctggtgaagatcgactcgatcaacggccagacccccgacgaggcg
cagacgcgcgtcgagttccagaagctcacgccgctctacccgcaggaccgcctgcgcctc
gagaccgagcccaccaagctcacgcagcgcatcatcgacctggtcgccccgatcggcaag
ggccagcgcggcctcatcgtcgcgccgcccaaggccggcaagacgatcgtgctgcagcag
atcgcgaacgccatctcgatcaacaaccccgaggtgcacctcatggtcgtgctcgtcgac
gagcgccccgaagaggtcaccgacatggagcgcacggtgaagggcgaggtcatcgcctcg
accttcgaccgcccggccgaagaccacaccacggtcgccgagctggcgatcgagcgggcg
aagcgtctcgtcgagctcggccacgacgtggtcgtgctgctcgactcgatcacccgcctc
ggccgcgcgtacaacctcgcggcaccggcctcgggccgcgtgctgtcgggcggtgtcgac
gcgtcggcgctctacccgccgaagcgcttcttcggcgccgcgcgcaacatcgagaacggc
ggttcgctcaccatcctcgccaccgcgctcgtcgagaccggctcgaagatggacgaggtg
atcttcgaggagttcaagggcaccggcaacagcgagctgcgcctcagccgccagctcgcc
gacaagcggatcttcccggcggtcgacgtgaacgcgtcgagcacgcgccgtgaagagatg
ctgctctcgcccgacgaggtcaagatcacctggaagctgcgtcgtgcgctcgccggcctc
gagccgcagcaggcgctcgaagccgtgctcgggcgcctccgcgagacgcagtcgaacacc
gagttcctgctgctcatgcagaagtcggcgcccgtgggcggcaacggccacggcgggcac
gcgcacgagtccgaccaccgctga
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