Agromyces larvae: MTO99_05050
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Entry
MTO99_05050 CDS
T09195
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
alav
Agromyces larvae
Pathway
alav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTO99_05050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alav03019
]
MTO99_05050
03009 Ribosome biogenesis [BR:
alav03009
]
MTO99_05050
Enzymes [BR:
alav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MTO99_05050
Messenger RNA biogenesis [BR:
alav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTO99_05050
Ribosome biogenesis [BR:
alav03009
]
Prokaryotic type
rRNA processing factors
MTO99_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UOE45148
LinkDB
All DBs
Position
complement(1083096..1085699)
Genome browser
AA seq
867 aa
AA seq
DB search
MVEGNENNAGGSETGAGAPKRRGGFFTGRRGRGRGGATVGARPATPGDAESTATDVPAEA
TTNDAPQPVESAVPAPAVETAAAEGTGSIDGAAGETTASAEVEPEASESAEHLAPIETSA
LTTTSLIFRAPPVLAVPDRPERSDRDRGDRDRGDRAGEEASSTVRRRARRRSGEEGRASG
DEPANTVVKVRKPREPELITEPQKVKGSTRLEAKKQRRRDGRDAGRRRAVITEAEFLARR
ESVDRQMIVRQKGGRIQIGVLEDGVLVEHYVARNQDASLIGNVYLGRVQNVLPSMEAAFV
DIGRGRNAVLYSGEVDWEAAAENGEKNQPRRIELALKPGDKVLVQVTKDPVGHKGARLTS
QVSLPGRYLVYVPNGSMNGISRKLPDTERARLKKILKEVLPENVGVIVRTAAEGATEEQL
TLDVNRLTAQWADISAALEKVQAPALLHSEPDLLVKIVRDVFNEDFQKMIIAGDEARQTI
ERYLGAVAPDLLERVEAYSGERDAFDEFRITEQIEKALERKVWLPSGGSLIIDRTEAMTV
VDVNTGKFVGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVL
RRLVECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLLESFSEPCEVCAGRGIIVHHEPIL
KHRAPQQQVERRRNRGGGQQHQPAPAAESKPHAGTHAITEDAKNALAKIAASTLAHGEPG
RPAADEPAAQAGDVVEAVPATTDAEPASESRGSRRRGRHRRATSADASASAGAPAGVPAS
EPAAADQPTAPAVPVLDLPEAPVRRERPKPAVDPDELLGSVLDALPAPKAQGEGRSRSRR
VSTTALSTAGAAPVIVRAEPTEADSAE
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaggcaacgagaacaacgccggcgggtcagagaccggcgcaggcgcaccgaag
cgacgcgggggattcttcaccgggcgacgcggtcgcgggcggggcggagcgacggtcggc
gcccgaccggcgacccccggcgacgccgagtcgacggcgacggacgtccccgccgaggcg
acgacgaacgacgcgccgcagccggtcgagtccgcggtgcccgccccggcggtcgagacc
gccgcggccgagggtacgggctcgatcgacggggcagcgggcgagacgaccgcgtccgcc
gaggtcgagcccgaggcatccgagtcggccgagcacctcgcgccgatcgagacgtccgcg
ctcacgacgacgtcgctgatcttccgagcgccgcccgtgctcgcggtgcccgatcggccc
gagcgcagcgaccgcgaccgcggcgaccgcgaccgcggcgaccgcgccggcgaggaagcc
tcgtcgaccgtgcgccgtcgcgcccgccgccgcagcggcgaagagggccgggcgtcgggc
gacgagcccgcgaacaccgtcgtcaaggtgcgcaagccccgcgaacccgagctcatcacc
gagccgcagaaggtgaaggggtcgacccgcctcgaggcgaagaagcagcgtcgccgcgac
ggccgtgacgcgggccggcgccgtgcggtgatcaccgaggccgagttcctcgcccgccgc
gagtcggtcgaccggcagatgatcgtccgtcagaagggcggccggatccagatcggcgtc
ctcgaggacggcgtgctcgtcgagcactacgtcgcgcgcaaccaggacgcgtcgctcatc
ggcaacgtgtacctcggccgcgtgcagaacgtgctgccgagcatggaggccgcgttcgtc
gacatcggccggggccgcaacgcggtgctctactcgggcgaggtcgactgggaggccgcc
gccgagaacggcgagaagaaccagccccgccgcatcgagctcgcgttgaagcccggcgac
aaggtgctcgtgcaggtcacgaaggacccggtcggccacaagggcgcccgcctcaccagc
caggtctcgctgcccggccgctacctcgtgtacgtgccgaacggctcgatgaacggcatc
agccgcaagctccccgacaccgagcgcgcgcgcctgaagaagatcctgaaagaggtcctg
cccgagaacgtcggcgtcatcgtgcgcacggcggcggagggcgcgaccgaggagcagctc
acgctcgacgtgaaccggctcaccgcccagtgggccgacatctcggcggcgctcgagaag
gtgcaggcgcccgcgctgctgcactccgagcccgacctgctcgtgaagatcgtgcgcgac
gtcttcaacgaggacttccagaagatgatcatcgccggcgacgaggctcggcagaccatc
gagcggtacctcggcgccgtagcgcccgacctgctcgagcgtgtcgaggcctactcgggc
gagcgcgacgcgttcgatgagttccgcatcaccgagcagatcgagaaggccctcgagcgc
aaggtgtggctgccgtcgggcggttcgctcatcatcgaccgcaccgaggcgatgaccgtc
gtcgacgtgaacaccggcaagttcgtcggatcgggcggcaacctcgaagagaccgtcacg
aagaacaacctcgaagcggccgaagagatcgtgcgccagctgcggctgcgcgacatcggc
ggcatcatcgtggtcgacttcatcgacatggtgctcgagtcgaaccgcgatctcgtgctg
cgtcgcctcgtcgagtgcctgagccgcgaccgcaccaagcaccaggtcgccgaggtcacc
tcgctcggcctcgtgcagatgacccgcaagaagctcggtctcgggttgctggagtcgttc
agcgagccgtgcgaggtctgcgccgggcgcggcatcatcgtgcaccacgagccgatcctg
aagcaccgtgccccgcagcagcaggtcgagcggcgccgcaaccgcggcggcggtcagcaa
catcagccggcacccgccgccgagtcgaagccgcacgcgggcacgcacgccatcaccgag
gacgcgaagaacgcactcgcgaagatcgcggcctccacgctcgcgcacggcgagcccgga
cgccccgccgccgacgagcccgccgcgcaggccggcgacgtcgtcgaggcggtgccggcg
accacggatgccgagcccgcgtcggagtcgcgcggctcgcgtcgccggggccggcaccgg
cgcgccacctcggcggacgcctcggcgtcggcgggcgcgcccgcgggcgtccccgcatcc
gaacccgctgccgccgaccagccgaccgctccggcggtgccggtgctcgacctgcccgag
gcgccggtgcgccgcgagcggcccaagccggcggtcgaccccgacgaactgctcggctcg
gtgctcgacgcgctgcccgcaccgaaggcgcagggcgaagggcgctcgcggagccggcgg
gtctcgaccacggcgctgagcaccgcgggtgccgccccggtgatcgtgcgcgccgaaccg
accgaggcggattcagccgagtga
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