Aulosira laxa: NIES50_01130
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Entry
NIES50_01130 CDS
T09879
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alax
Aulosira laxa
Brite
KEGG Orthology (KO) [BR:
alax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alax03032
]
NIES50_01130
03400 DNA repair and recombination proteins [BR:
alax03400
]
NIES50_01130
Enzymes [BR:
alax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES50_01130
DNA replication proteins [BR:
alax03032
]
Prokaryotic type
DNA Topoisomerases
NIES50_01130
DNA repair and recombination proteins [BR:
alax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES50_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
TPD52
DNA_ligase_ZBD
Toprim_2
zf_Tbcl
Motif
Other DBs
NCBI-ProteinID:
BAZ71570
LinkDB
All DBs
Position
121490..123673
Genome browser
AA seq
727 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGSEWIVRASCGHIRELSNEGEDSLGFTMDGSNVQCRYVP
RDQQAKETIQQLKAAVKQVQEVVLATDPDREGETIAWHLKEALGLRQPKRVVYTEITEAA
VRTAIAHPRELDTNLVGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREIQTFVPQDYWSVWVDYAEGFRAFYKGMANAPKEAAKEEAEVNDDAAVNSTQAPEST
RVLAEAEANRLVEEARRHPHKVVQFEGKIVNRQPPPPFITSTLQQAAGSRLRFAPEKTMQ
VAQKLYEAGLITYMRTDSVMLSPEFCDSARKWLEQNDPQNVPQKTTRHRSNKTAQEAHEA
IRPTDVFRPSVQLRLELTADEFNLYVLIWKRAIASQCRAAQLRKTLVITQSGDILWQARG
QIVEFLGYARYWPNLSKDSILPNLQQGQMLTLENAGHEKKQTQPPPRYSEPKLVQLMERK
GIGRPSTYSPTIATLKKRGYVQLAKDSLQPTTLGLEVDAFLQKALPDLLETEFTAKMEDA
LDAIASGKQQWQQYLTKWNESYFAPALAKAKTIVVSAATGVKNYPMAERKFETSRTRCPQ
CKNHLAKIKSSKVKKKYFLKCVSGCDNIVLFWSEYSKSWEAPRSQAAKETKEIKEATPQK
SKAAITKYSCPVCHKPLEEYSYVKDGQNKKMLRCSNPQSRNDKKHKDVAYFSTQKGWWSP
KLGELKG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgccttctagtggttgaatctccaggtaaagttaaaaagctcagtcaaatt
ctcggttctgagtggattgtacgcgctagttgcggtcacattcgcgaactgagtaatgaa
ggtgaggattccctgggctttactatggatgggagtaatgtgcagtgtcgctatgtcccc
cgggatcaacaggctaaggaaacgattcagcagttaaaggcggcggtaaagcaggtacag
gaagttgttttagctacagatccagatagagaaggggaaaccatcgcttggcacctcaag
gaagctttgggactgaggcaaccaaaacgggtggtgtacactgaaattacagaagcagca
gtcagaacagcgatcgcacatcctagagaattagatacaaatttggtaggggcgggattg
tgccgcgattgtttagataagttggtaggttataagggcagtcctttagtttgggctttg
aataatggggcgaaaagtgtcgggagagtgcaaagtgctaccttacatttaatctgtcaa
cgcgagagagaaattcaaacttttgtcccccaagattattggagtgtttgggtagattac
gctgaaggcttccgtgctttctacaaagggatggcgaatgcacctaaggaagcagcgaag
gaagaagcggaagttaatgacgatgcagcggtgaatagcacccaagcgccagaatctacc
cgtgtacttgcagaagcggaagcaaatcgcctagtagaagaggcgcgccgccatcctcac
aaagtggtgcaatttgaaggtaagattgttaaccgccaaccaccaccaccatttatcacc
tctactttacagcaagctgcgggttctcggttgcgctttgccccagagaagacaatgcag
gtagcacaaaagctctatgaggctgggctaattacttatatgcgaacagattcagtaatg
ctgagtccggagttctgtgatagcgcccgtaagtggttggagcaaaacgatccgcaaaat
gtcccccaaaaaactaccagacatcgcagtaacaaaactgctcaggaagcccatgaagcg
attcgccctacagatgtgtttcgcccttctgtgcagttacgcctagaactaactgcagat
gagtttaacttgtatgtcttaatttggaaaagagcgatcgcatcccaatgtcgagccgca
caactgcgaaaaaccctggtaattactcaatctggggatattctctggcaagcaagagga
caaattgtggagtttttaggttatgcgcgctactggcctaacctgagtaaagatagtatt
ttgcctaatttacaacaagggcaaatgctaactttagaaaatgctggacatgagaagaaa
caaacccaaccgccaccccgttacagcgaacccaaattagtacagttaatggagcgtaaa
ggcattggtcgtcctagtacctattctcccacaatcgccaccctgaaaaaacgcggatat
gtgcagttagccaaagatagtttacagccgacaacattggggttagaagtcgatgccttt
ttacagaaagccctacccgacttattagaaacagaatttactgccaaaatggaagatgcc
ctagatgcgatcgcatctggtaaacaacagtggcagcaatatctcaccaaatggaatgag
agttattttgcacccgccttagccaaagccaaaaccatcgtcgtgagtgcggcgactggc
gtaaaaaattatcctatggcggaacgcaaatttgagacttcccgcactcgttgcccacaa
tgcaagaatcatttagccaaaattaagagcagtaaagttaaaaagaaatatttcctcaaa
tgcgtcagtgggtgcgataacatcgtgctgttttggagcgaatatagcaaaagttgggaa
gcaccccgttctcaagccgcgaaggaaacgaaggaaattaaggaagcaactccgcaaaaa
tccaaagctgcaattaccaaatactcctgtccagtatgtcacaagcctttagaagaatac
agttatgtcaaagatggacagaacaagaaaatgctgcgctgttccaacccccaatcccgc
aacgataaaaaacacaaagatgtcgcctacttcagcacccagaaaggttggtggagtccg
aagttaggggagttgaaggggtga
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