Aulosira laxa: NIES50_34140
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Entry
NIES50_34140 CDS
T09879
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
alax
Aulosira laxa
Pathway
alax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIES50_34140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alax03021
]
NIES50_34140
03400 DNA repair and recombination proteins [BR:
alax03400
]
NIES50_34140
Enzymes [BR:
alax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIES50_34140
Transcription machinery [BR:
alax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIES50_34140
DNA repair and recombination proteins [BR:
alax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIES50_34140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Biotin_lipoyl_2
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
BAZ74835
LinkDB
All DBs
Position
4209559..4213614
Genome browser
AA seq
1351 aa
AA seq
DB search
MTNEQAIFRNRVVDKGQLRNLISWSFVNYGTARTAVMADKLKDLGFRYATKAGVSISVDD
LMVPPSKRALLEAAEEEIRATEARYQRGEITEVERFQKVIDTWNGTSEALKDEVVVHFKK
TNPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIIS
SYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIREFDCGTTRGIPLRAMVEGGKTKISL
ATRLLGRVLGEDVIDPKTKEVIAPRNTPVSDELAAKIQKSGVTEVLARSPLTCEAARSVC
QHCYGWSLAHAKMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVAQQVRSKIDG
TVKIPRKLKVRAYRTRHGEDALYVEANGILILEPKKVGTDTPPPQEVHLTQGSTLYVFDG
HQVKQGQLLAEVALGGRTARANTEKAVKDVATDLAGEVQFAEVVPEQKTDRQGNTTTTAA
RGGLIWILSGEVYNLPPGAELVVKNGDAIASNGVLAETKLTTLHGGTVRLPEATPGKSTR
EIEIITASVVLDQATVTVQSSQGRNNYLVTTGNNQVFNLRATPGTKVQNGQVVAELIDDR
YRTTTGGFLKFAGVEVQKKGKAKLGYEVVQGGTLLWIPEETHEVNKDISLLLVEDGQFVE
AGTEVVKDIFCQNSGVIEVTQKNDILREVVIKPGELLMVDDPEAVIGRDNTFIQPGEEFQ
GTVATELRYIQYVESPEGPALLSRPVVEFAVPTNPDVPSTTSVSQQTGRSIELRAVQRLP
YKDSERVKSVEGVELLRTQLVLEIEQEGEQDHNASPLAADIELIPDPDNADLQRLQLVIL
ESLVIRRDIAADATQGSTQTSLEVQDGQTIAPGAVVARTQILCKEGGTVRGVQKGSENVR
RCLVLRESVDKITVNTSVQPKAKAGDLLVEGAEIAPGIFAPESGQVLNIRNTTASAAAGE
SALSTQNYSVDIRIGRPYRVSPGAVLQIEDGDLVQRGDNLVLLVFERAKTGDIIQGLPRI
EELLEARKPKEACILCRRAGEVKVVYGDGDEAIAIKVVEPNGVVTDYPLGPGQNLVVTDG
SHVSAGQPLSDGPSNPHEILEVFFSLGSEDGVYACASHALQKVQTFLVNEVQLVYQSQGI
DIADKHIEVIVRQMTNKVRIDDGGDTTMLPGELVELRQVEQVNEAMAITGGARAQYTPVL
LGITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGYNAY
EETGAIDDYAALDSSSVLDEVDDPLDMVLDDRTARTYNLDAPSLTEPTFGATRRTERSIL
DDDDLIADEITDLVDDDDYEDDDDDDEDDYE
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgaacaggcaattttccgcaatcgcgtagttgataaaggccagctgagaaat
ttaatttcttggtcttttgtaaattacggtacagcacgtaccgcagtcatggcggacaaa
ctgaaagacttaggatttcgctatgccaccaaagctggggtatctatcagtgtcgatgat
ttgatggtgccaccttccaagcgggcgctgctagaagcagctgaagaagaaattcgcgct
actgaagctcgttaccaacgtggggaaattacggaagtagaacgctttcaaaaggtaatt
gatacctggaacggtactagtgaagccctgaaagatgaggtagttgttcactttaaaaag
accaatcccctcaattccgtgtacatgatggcattctctggtgcacggggtaatatctcc
caagtccggcagctggtagggatgcggggattgatggcagatccccaaggggaaattatt
gacttacccatcaaaaccaacttccgcgaaggactcaccgttacggaatacattatttcg
tcttacggtgcccgcaaagggctggtagatacagccttacggacggctgactctggttat
ctcacccgtcgtttggtagacgtatcccaggatgtgattattcgggaatttgattgcggg
actaccagaggtattcccttacgggcgatggtagaaggtgggaaaacaaaaatttccttg
gctacacgtttattgggaagggtgttaggtgaagatgtcatagatcccaaaaccaaagaa
gtcattgcccctcgcaataccccagtttccgatgaattggcagcaaaaatccaaaaatct
ggcgtaactgaagtcttggcgcgatcgcccttaacttgtgaagcggcacgttcagtttgt
caacattgctacggctggagtttagcccacgccaagatggtggacttgggtgaagctgta
gggattatcgctgcccaaagtattggggaaccaggtacccagctaactatgcggacattc
cacacaggtggtgtgttcacaggggaagtagcacaacaagtacgttcaaaaattgatggg
actgtcaaaattcctcggaagctgaaagtaagagcatatcgtacccgtcacggtgaagat
gctctgtatgtagaggccaacggtatcctgattttggaaccgaaaaaagtcggaaccgat
accccgcctccccaagaagtgcatctcactcaaggctctacactttatgtatttgatggg
caccaagtaaaacaaggtcagttgctagcagaagttgccctggggggacgtacagctcgc
gctaacaccgaaaaagcagtaaaagacgtagcaacagacttggcaggggaagtacagttt
gcggaagttgtacccgaacagaaaacagaccgccaaggcaataccaccaccacagccgct
aggggtggtttgatttggattttgtcaggggaagtgtataacttaccacctggtgctgaa
ttggtagtgaaaaatggcgatgcgatcgcctccaatggtgtactcgcagaaaccaaactc
actaccttgcatggtggtacagtccgcttgccagaagctactcccggtaagagtactagg
gaaattgaaattatcactgcttctgttgtcttagaccaagctactgtcaccgttcaaagc
tcccaaggtcgcaacaactacctagttactactggtaataaccaagtatttaacctcaga
gctacaccgggcacaaaagtgcaaaatggtcaagtggtagcggaattaattgatgaccgc
tatcgcaccaccactgggggcttcctgaaattcgcgggcgtagaagttcagaaaaaaggt
aaagccaagctcggttatgaagtagtacagggtggtaccctactgtggattcccgaagaa
acccacgaagtcaacaaagacatctccttgctattggtggaagatggacaattcgtggaa
gctggcaccgaagtcgtgaaggatatcttctgccaaaacagtggtgtaattgaagttact
cagaaaaacgacatcttgcgggaagtcgtgattaagccaggtgaactgctgatggtagac
gatcccgaagcagtcattggtcgagacaacaccttcattcaacccggagaagaattccaa
ggtacagtagctaccgaattgcgctatatccagtatgtggaatctccagaaggcccagct
ttattgagccgcccagtagtagagtttgctgtacccaccaaccctgatgtgccatctacc
acatctgtaagccaacaaactggacgttcgattgagttacgggcagtacaaagactacct
tacaaagattctgagcgtgtcaagtctgtggaaggcgtagaactgctgcgtacccaacta
gttttggaaatcgagcaggaaggcgaacaagaccacaatgcttctcctttagcagcggat
attgaattaatccccgatcctgacaatgccgatcttcagcgcttgcagttggtgattttg
gaatccttggtgattcgtcgcgatattgctgctgacgctacccaaggtagtacccaaact
tcactagaagtacaggatggacaaaccatcgcccctggtgcagttgttgctcgtacccaa
atcttgtgtaaagaaggcggtacagtgcgcggtgtccaaaaaggctcagaaaacgtccgt
cgctgtttagttttacgtgaaagtgttgacaaaatcacagtcaatactagcgtccaaccc
aaagctaaagcaggagacttgttagttgaaggtgcagaaattgcccctggcatttttgct
cctgaatctggtcaagtccttaatatcagaaatacgactgctagtgctgcggctggagaa
tcagcactcagtactcaaaattactccgttgatatccgtattggtcgtccctatcgagtc
agccctggtgctgtgttgcaaatcgaagacggcgatttggtacagcgtggtgataacttg
gtgttactggtatttgaacgtgccaaaactggggacattattcaaggtttgccccggatt
gaggaactactagaagcccgcaaacccaaagaagcttgtatcttatgccgtcgggctggt
gaagttaaggtagtttacggcgatggtgatgaagcgatcgcaattaaagtagtagaaccg
aatggagtagtcacagactatccccttggccctggacaaaacttagtggtgacagatggt
tcccatgtatctgcaggacaacccctcagtgatggcccttctaacccccacgaaattttg
gaagtcttctttagcctgggttctgaagatggagtctacgcttgtgctagccatgcttta
caaaaagtgcaaacattcttggtgaacgaagtgcagttagtatatcaatcccaaggtatt
gatattgctgacaaacacatcgaagtaattgttcgccagatgactaataaagtccggatt
gatgatggtggtgataccacaatgcttccgggtgaattggtggaattacgccaggttgag
caggtgaacgaagcaatggcgattactggcggtgctagggcacagtatacccctgtatta
ttagggatcaccaaagcatccttgaacaccgacagctttatttctgctgcttccttccaa
gaaactaccagagtcttaaccgaagccgccattgaaggtaaatctgactggctgcggggg
ttaaaagaaaacgtgatcatcggacgcttgattcctgcgggtactgggtacaatgcttat
gaagaaacaggagccattgatgattacgctgcactagatagcagcagcgtcttagatgaa
gtagatgatccgttagatatggtgctggacgatcgcacagctcgtacctacaatttagat
gctccgtctttgactgaacctacttttggtgctactagacgtacagaacggtctattttg
gatgacgatgacttaatcgccgatgaaatcaccgaccttgtagatgatgatgactatgag
gatgatgatgacgatgatgaggacgattacgaataa
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