Aulosira laxa: NIES50_43920
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Entry
NIES50_43920 CDS
T09879
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
alax
Aulosira laxa
Brite
KEGG Orthology (KO) [BR:
alax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alax03016
]
NIES50_43920 (ybbB)
Enzymes [BR:
alax01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
NIES50_43920 (ybbB)
Transfer RNA biogenesis [BR:
alax03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NIES50_43920 (ybbB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_18
DUF1378
AAA_33
RIOX1_C_WH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAZ75801
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All DBs
Position
5470272..5471339
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AA seq
355 aa
AA seq
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MSSSVTYTRLPWAETYSEIIDVRSPSEFIEDHIPGAINLPVLNDAERAEVGTIYKQVCSF
TARKIGAALVTRNIYQHLSQHFAAKDPDYHPLVYCGRGGQRSISMAVVLTQIGWQVTVID
GGYKTYRNYVRQQIEHLPAQFNYQMLCGLTGTGKTHILEKIRQRGAQVLDLESLANHRGS
LLGGQWPGKPISQPSQKYFESLLVQHLQQFNPQEVVWIESESIKIGQIYLPQSLWQKMRQ
ANCVEIQLPIAARVQFLLQEYPHLITHPDVLKRKLEKLKNRCGWEKLSQWYQLIDAGNWE
SLVQDILHCYYDPIYNHSTKSYFSKAYRFLSIPDLSDCSIENVLDSLLPNYVAIQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcagttacatatacgcgtctgccttgggctgaaacttacagtgaaattatt
gatgttcgttcgcctagtgaatttatagaagaccacattcctggcgcgattaatttacca
gtcttgaatgatgctgaacgcgctgaagtcggaacaatttataaacaagtttgctctttc
acagcgcgaaaaattggtgcagctttagtaacgagaaatatttaccaacatctcagccag
cactttgctgcaaaagatccagactaccatcctttagtgtactgtggacgaggtgggcag
cgttccattagcatggctgtggtactgacacaaattggttggcaagtgactgtaattgat
ggcggatacaagacttatcgtaactatgtccgccagcaaatagaacatttaccagcacaa
tttaactatcagatgttatgtggtttaactggtactggtaaaactcatattttagaaaaa
atccgtcagcgtggcgcacaagttttagacttagaaagtttagctaatcatcgcggttct
cttttaggcggacaatggccaggtaagccgatatcccaaccttcacaaaaatactttgaa
tctctcctagtacaacatctgcaacagtttaatccgcaggaagtagtttggattgaatca
gaaagtatcaaaattgggcaaatctatttacctcaatctttgtggcagaaaatgagacaa
gctaattgtgtagaaattcaactaccaatagctgctagagttcagttcttgttacaagaa
tatccccacttaattacccatcccgatgttttaaaacgcaagctagagaaactgaaaaat
cgctgtggttgggagaaattaagtcagtggtatcaattaattgatgctggtaattgggaa
tctttagtgcaagatatattacattgctattacgaccccatttataaccactcaacaaag
agttattttagtaaagcttacagatttttatcgattccagatttatcggattgtagtatt
gagaatgtgctagattctttgttgcccaattatgtggcaatacaatga
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