Altererythrobacter sp. B11: AEB_P0326
Help
Entry
AEB_P0326 CDS
T05671
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
alb
Altererythrobacter sp. B11
Pathway
alb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEB_P0326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alb03019
]
AEB_P0326
03400 DNA repair and recombination proteins [BR:
alb03400
]
AEB_P0326
Enzymes [BR:
alb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AEB_P0326
Messenger RNA biogenesis [BR:
alb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AEB_P0326
DNA repair and recombination proteins [BR:
alb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AEB_P0326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
RQC
Helicase_C
RecQ_Zn_bind
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
BBC71194
UniProt:
A0A2Z5YSR2
LinkDB
All DBs
Position
complement(366286..368052)
Genome browser
AA seq
588 aa
AA seq
DB search
MQGEAEAALRRIFGFEQFRGVQRDVVARVLAGQSTLAVMPTGAGKSLTYQLPACMLDGTC
VVVSPLIALMHDQLRSARANGIRAAALTSVDDDRMATMDAFRAGELDLLYVAPERASQPH
FRDLLGSARLALFAVDEAHCVSEWGHDFRPDYRQLRPLMDAFPAVPRLALTATADAHTRA
DILAQLGIGEDGLIVAGFDRPNIRYAIRHRENGLRQLVTLLAEERGPGIIYAPTRRKVED
LAERLASVSGRRVLPYHAGLPPEQRAANQAEFVASEDMVIVATIAFGMGIDKPDVRFVAH
AGIPKSIEAYYQETGRAGRDGDPARAVMLWAAGDFAQARQRLTELDEGRQAGERQRLDAL
AVLVETPTCRRAVLLRHFGEEPPERCGNCDNCLDAPDVIDTTELARKLLSAVYRTGQSYG
FGHLQKVLTGAEDERVRQKGHDKLSVFGIVGQAEARLLQPVSRALQARGSLVANEHGGLC
LAGDARDILTGGMPVVIVSPPAAGKRRRGRDAAPNPVGDPLFEALRNLRRELAEEAQVPP
YVVFHDATLREMAAARPTSLVELGAISGVGARKLEAYGEAFLAAIRAH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcgaagcggaagcggcgctgcggcggatcttcggattcgagcagttccgcggc
gtgcagcgcgacgtggtggcgcgcgttctggccgggcaatcgacgctggcggtgatgccc
accggtgcaggcaagtctctgacctatcaattgcccgcctgcatgctggacggcacctgc
gtggtcgtctccccgctcattgcgctgatgcacgaccagctgcgttcggcccgggccaac
ggcatccgtgcagccgcgctgaccagcgtggacgacgatcggatggcgacgatggacgcc
ttccgcgcgggcgagctggacctgctgtatgtcgcgcctgagcgtgccagccagccgcac
ttccgcgatctgctgggcagtgcccggctggcactgttcgcggtggacgaagcgcattgc
gtgtccgaatgggggcatgacttccgccccgactatcggcagctgcgcccgctgatggac
gccttccccgccgtgccgcggctggcgctgaccgccacggcggatgcgcataccagggcg
gatatcctggcgcagctgggcatcggggaggatgggctgatcgtcgccggcttcgaccgg
ccgaacatccgctatgccatccgccatcgcgagaacgggctgcgccaactggtgaccttg
ctggcggaggaacgcgggccgggcatcatctatgcccccacgcggcggaaggtggaggat
ctggcggagcggctcgccagtgtctccgggcggcgggtgctgccttaccacgccggcctg
ccgccggagcagcgcgccgccaatcaggccgaattcgtggccagcgaagacatggtgatc
gtggcgacgatcgctttcggcatggggatcgacaagcccgatgtccgcttcgtcgcccat
gcgggtatccctaagtcgatcgaagcctattaccaggagacgggccgtgccgggcgcgac
ggcgatcccgcgcgcgcggtgatgctgtgggcggcgggcgattttgcccaggcgcggcaa
aggctgacagaactggatgaggggcggcaggccggcgaacgccagcggctggatgcgctg
gccgtgctggtggaaacgcccacctgccgccgcgcggtgctgctgcgccatttcggagaa
gagccgcccgaacgctgcggcaattgcgacaattgcctggatgcgcccgacgtgatcgac
accacggagctggcgcgcaagctgctgagcgccgtctatcgtacgggccagagctatggc
ttcggccatctgcagaaggtgcttaccggtgcggaggacgagcgggtgcgccagaagggg
cacgacaagctatccgtgttcggcattgtcggacaggcggaagcgcggctgttgcagccg
gtcagccgtgccttgcaggcgcgtggcagccttgttgcgaacgaacacggcggcctgtgc
ctggcgggcgacgcgcgggacatcctgactggcggcatgcctgtggtaatcgtcagcccc
ccggcggctggaaagcggcggcgcgggcgcgatgcggcgcccaatcccgtgggcgatccg
ctgttcgaggccctgcgcaacctgcggcgcgaactggcggaagaagcgcaggtgccgccc
tatgtggtgttccacgatgccactttgcgcgaaatggctgccgcgcgtccgacgagcctc
gtcgaactcggcgcgatcagcggcgtcggggcgcgcaagctggaagcttacggcgaggcc
tttctggccgcgatccgcgcccactga
DBGET
integrated database retrieval system
