KEGG   Altererythrobacter sp. B11: AEB_P0410
Entry
AEB_P0410         CDS       T05671                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
alb  Altererythrobacter sp. B11
Brite
KEGG Orthology (KO) [BR:alb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alb03032]
    AEB_P0410
   03036 Chromosome and associated proteins [BR:alb03036]
    AEB_P0410
   03400 DNA repair and recombination proteins [BR:alb03400]
    AEB_P0410
DNA replication proteins [BR:alb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AEB_P0410
Chromosome and associated proteins [BR:alb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AEB_P0410
DNA repair and recombination proteins [BR:alb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AEB_P0410
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 Phage_cement_2 DUF2267 Peptidase_C23
Other DBs
NCBI-ProteinID: BBC71278
UniProt: A0A2Z5YSW9
LinkDB
Position
complement(459703..459978)
AA seq 91 aa
MNNSDLAEQLAAAHGVTKTDAKKLVDAVFAAIGDAAAKGEEVSLNGFGKFKVKASPARDG
RNPSTGETIKIKASKKLVFTPAKAVKDKLNG
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaacagcgacctggccgaacaactggctgccgcccacggcgtcaccaagaccgat
gcgaagaagctcgtcgatgcggtgttcgccgcgatcggtgacgcagccgccaagggcgag
gaagtctcactcaacggcttcggcaagttcaaggtgaaggccagcccagcgcgcgacggc
cgcaatccatcgaccggcgagacgatcaagatcaaggcgtcgaagaagctggtgttcacg
cccgccaaagcggtcaaggacaagctcaacggctga

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