Altererythrobacter sp. B11: AEB_P0585
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Entry
AEB_P0585 CDS
T05671
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
alb
Altererythrobacter sp. B11
Pathway
alb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEB_P0585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alb03021
]
AEB_P0585
03019 Messenger RNA biogenesis [BR:
alb03019
]
AEB_P0585
Transcription machinery [BR:
alb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AEB_P0585
Messenger RNA biogenesis [BR:
alb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AEB_P0585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
ATPase_2
Spore_III_AA
AAA_22
S1CSD-TOTE-2
AAA_25
AAA
AAA_14
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
BBC71453
LinkDB
All DBs
Position
complement(630147..631403)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLKELKKRAPAELVSMAEELGVEGASTMRRQDLMFAILKEVADDGEEILGIGTIEVLQD
GFGFLRSPEANYLAGPDDIYVSPNQVRKWGLRTGDTVEGEIRAPRDGERYFALTKLLKVN
YDDPDAVRHRTNFDNLTPLYPEERLILDTVDPTVKDKSARVIDLISPQGKGQRALIVAPP
RTGKTVLLQNIAKAITDNHPEVFLLVLLVDERPEEVTDMQRSVKGEVISSTFDEPAQRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV
GKSGTRKEELLVPKEQLSKMWVLRRILMQMGTIDSMEFLLDKMKDSKTNEDFFATMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaaagaattgaagaaaagggcgccggccgagctggtttcgatggccgaggag
ctcggtgtcgaaggcgccagcaccatgcgccggcaggacctgatgttcgccatcctaaag
gaagtggcggacgacggggaggaaatcctcggcattggcaccatcgaggtgctgcaggac
ggctttggcttcctgcgtagcccggaagcgaattatctcgccgggccggacgacatctat
gtttcccccaatcaggtccggaaatggggcctgcgcaccggtgacacggtggagggcgag
attcgggccccccgcgacggggagcggtatttcgcgctgaccaagctgctcaaggtcaat
tacgacgatccagacgccgtgcggcatcgcaccaatttcgataacctcacaccgctctat
ccggaagaacggctgatcctcgataccgtggatcccaccgtgaaagacaaatcggcgcgg
gtgatcgatctcatcagcccacagggtaagggccagcgcgcgcttatcgtggctccgccg
cggaccggcaagaccgtgcttctgcagaacatcgccaaggcgatcacggataaccatccg
gaggttttcctgctggtgctcctggttgatgagcggccggaggaagtgacggacatgcag
cggagcgtgaagggcgaggtgatctcctcgaccttcgacgagcccgcacagcgtcacgtc
caggttgcggaaatggtcatcgaaaaggccaagcgcctggtcgagcacaagaaggacgtg
gtaatccttctggactcgatcacgcgtctgggccgcgcttacaacacggtggtgccgagc
tctggcaaggtgctgaccggcggcgtggacgccaacgcactccagcggcccaagcgcttc
ttcggtgctgcgcgcaacatcgaggaaggcggttcgctctcgatcattgctacggcgctg
atcgataccggtagccgaatggatgaagtgatctttgaagagttcaagggcaccggcaac
tcggaaatcgtgctggaccgcaaggttgcggacaagcgcatcttcccggcgctggatgtt
ggcaagtccggcacgcgcaaggaagagctgctcgttccgaaggagcagctatccaagatg
tgggtgctgcgtcgcatcctcatgcaaatggggacgatcgattcgatggaattccttctc
gataagatgaaggattccaagacgaacgaagatttcttcgcgacgatgaaccagtaa
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