Altererythrobacter sp. B11: AEB_P0911
Help
Entry
AEB_P0911 CDS
T05671
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
alb
Altererythrobacter sp. B11
Pathway
alb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AEB_P0911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alb03021
]
AEB_P0911
03400 DNA repair and recombination proteins [BR:
alb03400
]
AEB_P0911
Enzymes [BR:
alb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AEB_P0911
Transcription machinery [BR:
alb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AEB_P0911
DNA repair and recombination proteins [BR:
alb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AEB_P0911
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
MYO10_CC
IniB
B
Motif
Other DBs
NCBI-ProteinID:
BBC71779
LinkDB
All DBs
Position
939594..943775
Genome browser
AA seq
1393 aa
AA seq
DB search
MATQAKAPTTSSAAGTGSKKKRIRKIFGDIHEVVQMPNLIEVQRESYEQFLRSDPSIGYV
SGLEKTLRSVFPIRDFAGTAELDFVHYELEDPKYDTTECRQRGITYAAPMKVTLRLIVFE
VDHETETRSVLDIKEQDVYMGDMPLMTGNGTFIINGTERVIVSQMHRSPGVLFDHDRGKT
HSSGKFLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLYGLGLDSEDILDYF
YNKVVWKRGQDGWEIPFVAEAWRGQKPAFPLVNAETGEEVFPAGQKVSPRAANKAAKDGL
ARLLIPTEEIFGHYSARDLIDESTGRIYIEAGDEVSPENLDKLDAAGIDQLDLLDVDHVN
TGPWIRNTMKADKAENRDEGLEAIYKVMRPGEPPTKETAEALFEGLFFDGDRYDLSAVGR
VKLNMRLGLDAEDTVTTLRKEDILAVVKELVDLKDGKGEVDDIDNLGNRRVRSVGELLEN
QYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLS
EVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSTFARVN
KYGFIETPYRTITENKVTGEVKYLSAMEEQKHTVAQASAELDGSGGFVEELVSARQNGEF
VMSPRDQITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKAEAPFVGT
GMEETVARDSGAAIGAARGGVVDQVDATRIVIRASGEVDAGNPGVDIYNLQKFQRSNQNT
CINQRPLVKVGDVIEAGDIIADGPSTDLGELALGKNSLVAFMPWNGYNYEDSILISERIV
KDDVFTSIHIEEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVHPGDIL
VGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVEVRVFNRHGIEIDD
RTRAIQNEEIERLKKDSEDERNILNRATYNRLREMLDGQTASAAPKGVKKGTVITQDLLD
EVERHEWFKFAVADDNMQAQLEAVKGQYDEAVKRIKDKFEDRKEKLERGDELAPGVLKMV
KVFVAVKRKLQPGDKMAGRHGNKGVISRILPAEDMPFLEDGTPVDIVLNPLGVPSRMNVG
QIFETHLGMAARGLGQQVTAALEEWREANPDPEAAAPPAAVVEKLKDVYGEQYHADIESR
TTDEIVELASNLKNGVPMGTPVFDGAKEQDVTDMLLKAGYSSSGQVTLYDGRTGEAFDRK
VTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAA
YTLQEMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELSSLNE
GEEDDDGLQIAAE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggccacccaggcgaaggctccgaccaccagcagcgctgccggcaccggttccaagaag
aagcgcatccgcaagatcttcggcgacatccacgaagtggtgcagatgccgaacctgatc
gaggtgcagcgcgaatcctacgagcagttcctgcgttccgatccttcgatcggctatgtc
tcgggcctcgaaaagacgctgcgttcggtgttcccgatccgcgatttcgccggcacggcc
gaactggacttcgtgcattacgagctcgaggatccgaaatacgacaccaccgaatgccgc
cagcgcggcatcacctatgcggcgccgatgaaggtgacgctgcgcctgatcgtgttcgaa
gtggaccacgagaccgaaacccgctccgtgctcgatatcaaggagcaggacgtctacatg
ggcgacatgccgctgatgacgggcaacggcaccttcatcatcaacggtaccgagcgcgtg
atcgtcagccagatgcaccgttcgccgggcgtgctgttcgaccatgaccgcggcaagacc
cattccagcggcaagttcctctttgccgcccgcgtgatcccctatcgcggttcgtggctg
gatttcgaattcgacgccaaggacatcgtgaacgtgcgtatcgaccgcaagcgcaagctg
ccggtcaccgcgctgctctatggtctcggcctcgatagcgaggacattctcgactatttc
tacaacaaggtcgtctggaagcgcggccaggacggctgggaaattcccttcgtcgccgag
gcatggcgcggccagaagccggccttcccgctggtgaatgccgaaacgggcgaggaagtg
ttccccgccgggcagaaggtttcgccccgcgccgccaacaaggcggccaaggacgggctg
gcgcgcctgctgatcccgaccgaggaaatcttcggccattattcggcgcgcgacctgatc
gatgaaagcaccggccgcatctatatcgaggcgggcgacgaggtttcgcctgaaaacctc
gataagctggatgccgctggcatcgaccagctcgatctgctggacgtggatcacgtcaac
accggcccctggatccgcaacaccatgaaggcggacaaggcggagaaccgcgacgagggc
ctggaagccatctacaaggtgatgcgcccgggcgagccgccgacgaaggagacggccgag
gcgctgttcgaaggcctgttcttcgacggcgatcgctatgacctgtcggccgtgggccgc
gtgaagctcaacatgcgccttggccttgatgccgaggacacggtgacgacgctgcgcaag
gaagacatcctggccgtggtgaaggagctggtcgatctcaaggacggcaagggcgaggtc
gatgacatcgacaacctcggcaaccgccgcgtgcgttcggtgggcgagctgctggaaaac
cagtatcgcgtcggcctgctgcgcatggagcgcgcggtgaaggagcgcatgtcgtcggtc
gacgtgtcgacggtgatgccgaacgacctcatcaacgcgaagcccgccgtggccgcggtg
cgcgagttcttcggctccagccagctgtcgcagttcatggaccagaccaacccgctgtcc
gaagtgacgcacaagcgccgcgtttcggccctcgggccgggcggcctcacccgcgagcgc
gcgggcttcgaggtccgcgacgtccatccgacgcattatggccgcatctgtccgattgaa
acgccggaaggcccgaacatcggcctgatcaactcgctgtccaccttcgcgcgggtgaac
aagtacggcttcatcgaaacgccgtatcgcaccatcaccgaaaacaaggtgacgggcgag
gtgaagtatctctccgccatggaagagcagaagcacaccgtggcgcaggcttcggccgag
ctcgacggcagcggcggcttcgtggaagagctcgtctcggcgcgccagaacggcgaattc
gtgatgagcccgcgtgaccagatcacgctgatggacgtcagtcccaagcagctcgtctcc
gttgcagcctcgctgatcccgttcctggaaaacgacgacgccaaccgcgcgctgatgggc
tccaacatgcagcgccaggccgtgccgctggtgaaggcggaagcgcccttcgtcggcacc
ggcatggaagagacggttgcccgtgactcgggcgcggcgatcggtgcggcgcgcggcggc
gtggtcgatcaggtggatgccacccgcatcgtcatccgtgcctcgggcgaggtggatgcc
ggcaatccgggcgtggacatctacaatctgcagaagttccagcgttccaaccagaacacc
tgcatcaaccagcgcccgctggtgaaggtgggtgacgtgatcgaggccggcgacatcatt
gccgacggtccctcgaccgacctgggcgagctggcgctgggcaagaacagcctcgtcgcc
ttcatgccgtggaacggctacaactatgaggactccatcctgatctccgagcggatcgtg
aaggatgacgtcttcacctcgatccatatcgaggagttcgaggtgatggctcgcgacacc
aagctggggccggaagacatcacgcgcgacattcccaatgtcggcgaggaagcgctgcgc
aacctcgacgaggcgggcatcgtctatatcggcgcggaagtgcatccgggcgacatcctg
gtgggcaagatcacgcccaagggcgaaagcccgatgaccccggaagagaagctgctgcgc
gcgatcttcggcgaaaaggccagcgacgtgcgcgacacctcgctccgcctgccgccgggc
gtggccggcacgatcgtggaagtgcgcgtgttcaaccgccacggcatcgagatcgacgac
cgtacccgcgcgatccagaacgaggaaatcgaacgcctcaagaaggacagcgaggacgag
cgcaacatcctcaaccgggcgacctacaaccgcctgcgcgagatgctggatgggcagacc
gcctctgctgcgcccaagggcgtgaagaagggcaccgtcatcacccaggatctgctggat
gaggtggagcgccacgaatggttcaagttcgccgtcgccgacgacaacatgcaggcccag
ctggaagcggtgaagggccagtatgacgaggcggtgaagcgcatcaaggacaagttcgaa
gaccgcaaggagaagctcgagcggggcgacgaactggccccgggcgtgctgaagatggtc
aaggtgttcgtggcggtgaagcgcaagctgcagccgggcgacaagatggccggccgccac
ggcaacaagggtgtgatcagccgcatcctgccggcggaggacatgccgttcctggaggac
ggcacgccggtggacatcgtgctgaacccgctgggcgtgccttcgcgcatgaacgtcggc
cagatcttcgagacccatctgggcatggccgcgcgcggccttggccagcaggtcaccgcg
gcgctggaggaatggcgcgaagccaatcccgatccggaggcggcggctccgccggcggcc
gtggtcgagaagctgaaggacgtctatggcgagcagtatcatgccgacatcgaaagccgc
accacggacgagatcgtcgagcttgcctccaacctgaagaacggcgtgcccatgggcact
ccggtgttcgacggcgcgaaggagcaggacgtcaccgacatgctgctcaaggccggctac
agcagctccggccaggtgacgctgtatgacgggcgcacgggcgaggcgttcgaccgcaag
gtgacggtgggctatatctacatgctcaagctgcaccacctggtggacgacaagatccac
gcgcgttccatcggcccctacagcctcgtcacccagcagccgctgggcggcaaggcccag
ttcggcggccagcgcttcggcgagatggaggtgtgggcgctgcaggcttacggcgcggct
tacacgctgcaggaaatgctgacggtgaagtccgacgacgtggtcggccgcaccaaggtc
tacgaggcgatcgtcaagggcgacgacaccttcgaggccggcattcccgaaagcttcaac
gtgctcgtcaaggaaatgcgctcgctgggcctcaacgtcgaactctcctcgctcaacgag
ggcgaggaagacgacgacgggctgcagatcgcggctgaatga
DBGET
integrated database retrieval system
