Altererythrobacter sp. B11: AEB_P0912
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Entry
AEB_P0912 CDS
T05671
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
alb
Altererythrobacter sp. B11
Pathway
alb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AEB_P0912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alb03021
]
AEB_P0912
03400 DNA repair and recombination proteins [BR:
alb03400
]
AEB_P0912
Enzymes [BR:
alb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AEB_P0912
Transcription machinery [BR:
alb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AEB_P0912
DNA repair and recombination proteins [BR:
alb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AEB_P0912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Peptidase_M23
Apocytochr_F_C
RPOC_hybrid
YqfD
Motif
Other DBs
NCBI-ProteinID:
BBC71780
UniProt:
A0A2Z5YUT2
LinkDB
All DBs
Position
943844..948175
Genome browser
AA seq
1443 aa
AA seq
DB search
MNELTKFTNQLAKPETFDQIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERILYFESYVVTEPGLTPLEKYQLLTEDELLDAQDEYGEDAFTAG
IGAEAVKHMLMDLDLVQERDDLLEELATTKSALKPKKIIKRLKVVESFIDSGNRPEWMIL
EVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGIYYLSMDRDGEPGEGMVLADIAEVHQALHV
GAVTLHTKITSRVPQTDEAGKQYMRRVETTPGRMLIGECLPKNHKVPYEVINRLLTKKDI
GEVIDEVYRHTGQKDTVLFADAIMALGFRHACRAGISFGKDDMIIPDSKQGMIEETKALV
ADYEQQYQEGFITQQEKYNKVIDAWSRCGDQVANAMMDEIRATPKDDSGREAPINSIYMM
SHSGARGSPAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLAD
TALKTANSGYLTRRLVDVSQDCVIVEEDCKTENALEMRAIIQGGSVIASLAERILGRTTA
EDLVNAKTGEVIVKAGTLLDEPMVKAIEEAEVQSAKIRSPLVCEAEQGVCGKCYGRDLAR
GTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQVNETSHLESISDGKVVYRDMPLI
TDKRGRRLSLARNGEMVVVDAQGRERAIHRVPYGTMLMFEDGAAVKEGDRLAEWDPFTLP
IITEQSGVVRYQDLAEGKTMEERVDEATGIAQRVVTEYRASGRSKKEDLRPRLTLLNEAG
DETEAARYMLAPGTTLSVEDGQQVEAGDILARASREAAKTRDITGGLPRVAELFEARIPK
DNAVIAKISGRIEFVRDYKAKRKIAIIPEEGDPVEYLIPKTKVIDVQEGDFVKKGDTLIS
GSPNPHDILEVLGVEALAEYLVAEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITDGGDT
TLLPGEQVDLEEMNEVNSKLSKGKQPAVGTPILLGITKASLQTRSFISAASFQETTRVLT
QAAVEGKKDTLIGLKENVIVGRLIPAGTGAGMNRLRVTATSRDAAIRAQYRKMQEALIAP
NSAAEEHAAELLRDPADDLGDDALASVEGETHGTDADAGDYLIQSDEAAPDATDTTPLED
EEE
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgaccaaattcacgaaccagctcgccaagcccgagaccttcgaccagatc
cagatcggcatcgcgagcccggagcgtatccgcagctggtccttcggcgagatcaagaag
ccggaaaccatcaactaccgcaccttcaagccggagcgtgacggcctgttctgcgcgcgc
atcttcggccccgtgaaggattacgagtgcctgtgcggcaagtacaagcgcatgaagtac
aagggcgtcgtctgcgaaaagtgcggcgtcgaagtgacggtgaccaaggtccgccgcgag
cgcatgggccatatcgagctggccgcgccggtggcgcatatctggttcctcaagagcctg
cccagccgcatcggcctgctgctcgacatgcagctgaagcagcttgagcgcatcctgtac
ttcgaaagctacgtcgtcaccgagccgggcctcacgccgctggagaagtaccagctgctg
accgaggacgaactgctcgacgcgcaggacgaatatggcgaggacgccttcaccgccggc
atcggtgccgaggccgtgaagcacatgctgatggacctcgacctcgtgcaggagcgtgac
gacctgctggaagagctggcgaccaccaagtccgcgctcaagccgaagaagatcatcaag
cggctgaaggtcgtggaaagcttcatcgattccggcaaccgcccggaatggatgatcctg
gaagtcgtgcccgtgatcccgcccgagctgcgcccgctggtgccgctggacggcggccgc
ttcgcgacctcggatctcaacgatctctatcgccgcgtgattaaccgcaacaaccgcctc
aagcgcctgatggagctgcgcgcgcccgacatcatcgtgcgcaacgaaaagcgcatgctg
caggaagccgttgacgcgctgttcgacaacggccgccgcggccgcgtgatcaccggcgcc
aacaagcgtccgctcaagtcgctgtccgacatgctcaagggcaagcagggccgcttccgt
cagaacctgctcggcaagcgcgtcgactattcgggccgttccgtgatcgtgaccggtccg
gagctcaagctgcaccagtgcggcctgccgaagaagatggcgctcgagctgttcaagccg
ttcatctacgcgcgcctcgatgccaagggtctgtccatgaccctgaagcaggcgaagaag
tgggtcgagaaggagcgcaaggaagtctgggacatcctcgacgaggtgatccgcgagcat
ccggtgctgctgaaccgcgcgcccacgctccaccgccttggcatccaggcgttcgagccc
gtcctgatcgaaggcaaggcgatccagctccacccgctggtctgctcggccttcaatgcc
gacttcgacggtgaccagatggccgtgcacgttccgctgagcctcgaggcgcagctggaa
gcgcgcgtgctgatgatgtccaccaacaacatcctcagccccgccaacgggaagccgatc
atcgtgccttcgcaggacatggtgctgggcatctattacctctccatggatcgcgatggc
gagccgggcgagggcatggtgctggccgatatcgccgaagtgcatcaggcgctgcatgtc
ggcgcggtgacgctgcacacgaagatcaccagccgcgtcccgcagacggacgaggccggc
aagcagtacatgcggcgtgtggaaaccaccccgggccgcatgctgatcggcgagtgcctg
ccgaagaaccacaaggtgccctacgaggtcatcaaccgcctgctgaccaagaaggacatc
ggcgaggtgatcgacgaggtctatcgccacaccggccagaaggacacggtgctgttcgcc
gacgccatcatggcgctgggcttccgccacgcgtgccgtgccggcatttccttcggcaag
gacgacatgatcatccccgattccaagcagggcatgatcgaggagaccaaggcactggtt
gccgattacgagcagcagtaccaggaaggcttcatcacccagcaggagaagtacaacaag
gtgatcgacgcgtggagccgttgcggtgaccaggtggcgaacgccatgatggacgagatc
cgcgcgacgccgaaggatgacagcggccgcgaggcaccgatcaactcgatctacatgatg
agccattccggtgcgcgtggttccccggcgcagatgaagcagctggccggcatgcgcggc
ctgatggccaagccgagcggcgagatcatcgaaacgccgatcatctcgaacttcaaggaa
ggcctgaccgtccttgaatacttcaactccacccacggcgcccgcaagggcctggcggac
acggcgctcaagacggcgaactcggggtacctgacccgccgcctggtcgacgtgtcgcag
gattgcgtcatcgtggaagaggactgcaagaccgagaacgcgctggaaatgcgtgcgatc
atccagggcggcagcgtaatcgccagcctggctgagcgcatcctcggccgcaccacggcc
gaagacctggtgaacgccaagacgggcgaagtgatcgtgaaggcgggcacgctgctggac
gaaccgatggtgaaggccatcgaggaagccgaagtgcagtccgccaagatccgcagcccg
ctggtttgcgaggcggagcagggcgtctgcggcaagtgctacgggcgcgatctggcccgc
ggtacgccggtgaacatcggcgaggctgtgggcgtgatcgccgcgcagtccatcggtgag
ccgggcacgcagctgaccatgcgtaccttccacatcggcggtgcggcgcaggtgaacgaa
accagccacctggaaagcatcagcgacggcaaggtcgtctatcgcgacatgccgctcatc
accgacaagcggggccgccgcctgtcgctcgcccgcaacggcgagatggtggtggtcgac
gcccagggccgtgagcgcgcgatccatcgcgtgccttacggcaccatgctgatgttcgag
gacggcgccgcggtgaaggaaggcgatcgcctggccgagtgggatccgttcaccctgccg
atcatcaccgagcagtcgggcgtggtccgttaccaggacctggccgaaggcaagacgatg
gaagagcgggtggacgaagccaccggcatcgcccagcgcgtcgtgaccgaatatcgcgcc
agcggtcgttcgaagaaggaggatctgcgtccgcgcctgaccctgctgaacgaagccggc
gacgagacggaggccgcacgctacatgctggcgccgggcaccaccctgtcggtggaagat
ggccagcaggtggaagcgggcgacatcctggcgcgtgcctcgcgcgaagccgccaagacg
cgcgacatcaccggcggtctgccgcgtgttgccgagctgttcgaggcgcggattccgaag
gacaatgcggtgatcgccaagatcagcggccgcatcgaattcgtccgcgactacaaggcc
aagcgcaagatcgcgatcattccggaagagggtgatcccgtcgagtacctgatccccaag
accaaggtgatcgacgtgcaggaaggcgacttcgtgaagaagggcgatacgctcatctcg
ggaagccccaacccgcatgacattctggaagtgctcggggtggaggctctggccgaatac
ctcgtggcggaaatccaggaagtctatcgactgcagggcgtgaagatcaacgacaagcac
atcgaggtgatcgttcgccagatgctgcagaaggttgagatcaccgatggcggcgacacc
acgctgctgccgggcgaacaggtcgatctggaagagatgaacgaggtgaacagcaagctt
tccaagggcaagcagcctgcggtgggcacgccgatcctcctcggcatcaccaaggccagc
ctgcagacccgcagcttcatctccgccgcgtccttccaggaaaccacccgcgtgctcacg
caggcggccgtggaaggcaagaaggacacgctgatcggtctcaaggagaacgtgatcgtt
ggccgtctcatccccgccggcaccggcgcgggcatgaaccggctgcgcgtcaccgccacc
agccgcgatgcggcgatccgcgcccagtatcgcaagatgcaggaagcgctgatcgcgccg
aattcggctgccgaggagcatgcggccgaactcctccgtgatccggcggacgatctgggc
gacgacgcgctggcttcggtggagggcgagacccacggcaccgatgccgatgcgggcgat
tacctgatccagagcgacgaggctgcgcccgacgccacggacaccacgccgctggaggac
gaggaggaataa
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