Altererythrobacter sp. B11: AEB_P1974
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Entry
AEB_P1974 CDS
T05671
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alb
Altererythrobacter sp. B11
Brite
KEGG Orthology (KO) [BR:
alb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alb03032
]
AEB_P1974
03400 DNA repair and recombination proteins [BR:
alb03400
]
AEB_P1974
Enzymes [BR:
alb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AEB_P1974
DNA replication proteins [BR:
alb03032
]
Prokaryotic type
DNA Topoisomerases
AEB_P1974
DNA repair and recombination proteins [BR:
alb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AEB_P1974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BBC72842
UniProt:
A0A2Z5YXG1
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All DBs
Position
2073220..2075802
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AA seq
860 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGKDYKVLASYGHVRDLPPKDGSVRPDEGFAMDWEVYADKRN
RDQVKAIADAAKKADRLILATDPDREGEAISWHVLELLKNRKAVPQDVERVTFNAITKQA
VTEAMAHPRALDTDLIEAYLARRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLIVD
REREIEAFVAQEYWSVVARMEQDGTGFDARLVKFDGEKLDRLSIGDKGTAERAKAAVEAG
RFTVEDVETRPLKRNPAPPFTTSTLQQEAARKLGFSASHTMRCAQNLYEAGAITYMRTDG
VQMDGSAISAARKAIADRYDGHYLPEKPRIYQTKAKNAQEAHEAIRPTDFMKDRAGSGDE
AKLYDLIFKRAMASQMAAASLERTTVTLRDPTGRHELRATGQVVKFAGFLAVYEEGRDQK
DDDEEEGLLPLIRKGDAPAKKGVDATQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTI
QTLRDRTYVRMEKNRFFAEDSGRLLTAFLERFFPRYVAYDFTAGMEDELDEVSGGRAEWK
ALLEAFWRDFKPKSDEVMEQKPSEITEVLDEFLSDYLFPPKADGSDPRACPKCIAEGREG
GHLALRGGRYGAFIGCANYPECTFRRRFGQPGEEGEAEDTAMGVDPETGLEVQRKVGRFG
PYVQLGEGKEAKRASIPRDLPDFDLDWALRLLSLPRTVGVHPETGKDITASIGRYGPYLA
HDGKYAKLSSTRDVFDTGMNAAVSLLAEAANRKGGGGRAKAEPIKTLGTHPTSGGEIKVM
PGRYGPYVTDGTTNATIPKDMKPEDVTEAQAVELIDARAAKAPAKKKPARKKAAAKKAPA
KKPAAKKKAPAKKAGAEEGA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgttatcgttgaatcgccggccaaggcgaagaccatcgagaaatatctcggc
aaggactacaaggtcctcgcctcctatggccatgtgcgcgacctgccgcccaaggatggc
agcgtgcggcccgatgagggcttcgcgatggactgggaggtctatgccgacaagcgcaac
cgcgatcaggtgaaggccatcgccgatgcggcgaagaaggcagaccgcctgatcctcgcc
accgaccccgatcgcgaaggggaggcgatcagctggcacgtgctggagctgctgaagaac
cgcaaggctgtcccgcaggatgtggagcgggtgaccttcaacgccatcaccaagcaggcc
gtgaccgaggcgatggcgcatccgcgcgcgctggataccgatctgatcgaagcctatctg
gcgcgccgcgcgctggattacctgttcggcttcaccctcagcccggtgctgtggcgcaag
ctgcccggcgcgaagagtgccgggcgcgttcaatccgtcgccctgcgtctgatcgtggat
cgcgagcgcgagatcgaagccttcgtcgcgcaggaatactggtctgtcgtcgcgcggatg
gagcaggacggcaccggtttcgacgcccgtctggtgaagttcgacggcgagaagctggac
cggctgtccatcggcgacaagggcacggccgaacgcgcgaaggcggcggtagaagcgggc
cgcttcaccgtggaggacgtggaaacccggccgctgaagcgcaatccggcgccgcccttc
accacctccacgctgcagcaggaggcggcgcgcaagctcggcttctccgccagccacacg
atgcgctgcgcccagaacctctacgaggccggggccatcacctatatgcgaaccgacggc
gtgcagatggatggcagcgccatcagcgccgcgcgcaaggccatcgccgaccggtatgac
gggcattacctgcccgaaaagccgcgcatctatcagaccaaggcgaagaatgcgcaggaa
gcgcatgaggcgatccggccgaccgacttcatgaaggatcgcgcaggctccggcgacgag
gcgaagctttacgacctgatcttcaagcgggccatggccagccagatggcggcggccagt
ctggagcggaccacggtgacgctgcgcgatcccaccggaaggcacgagctgcgcgccacc
gggcaggtggtcaagttcgcgggcttcctcgccgtctatgaagaaggccgcgaccagaag
gacgatgatgaggaggaaggcctgctgccgctgatccgcaagggggatgcgccggccaag
aagggggtggatgccacgcagcacttcacccagccgccgccgcgcttttccgaagccagc
ctggtgaagcggctggaggaactgggcatcggccgcccgtccacctatgcctcgaccatc
cagacgctgcgcgatcgcacctatgtgcggatggaaaagaaccgcttcttcgcggaagat
tccggccgcctgctcaccgctttcctcgaacgcttctttccgcgctacgtcgcttacgac
ttcaccgccgggatggaagacgagctggacgaggtttcgggcgggcgcgccgaatggaag
gcgctgctcgaggctttctggcgcgacttcaagcccaagagcgacgaggtgatggaacag
aagccctcggaaatcaccgaggtgctcgacgagtttctgtccgactacctgttcccgccc
aaggccgatggcagcgatccgcgcgcctgcccgaagtgcatcgccgaaggccgcgaaggc
gggcatctggcgctgcgcgggggtcgctacggcgcgttcatcggctgcgcgaattacccc
gaatgcaccttccgccgccgcttcggccagccgggcgaggagggcgaggccgaggatacg
gccatgggcgtcgatccggaaacggggctggaagtgcagcgcaaggtcggccgcttcggc
ccctatgtgcagctgggcgagggcaaggaggcgaaacgcgcctccatcccgcgcgacctg
ccggacttcgacctggactgggcgctcaggctgctcagcctgccgcgcaccgtgggtgtc
cacccggagacgggcaaggacatcaccgccagcatcggccgctatggcccctatctggcg
catgacgggaaatacgcgaagctctcctccacccgtgacgtgttcgacaccggcatgaat
gccgccgtctcgctgctggcggaggcggccaatcgcaagggtggcggcggccgtgccaag
gccgaaccgatcaagacgctgggcacgcacccgaccagcggcggggagatcaaggtgatg
cccgggcgctatggcccctatgtcaccgacggcaccaccaatgcgaccatcccgaaggat
atgaagcccgaggatgtgacggaagcacaagcggtggagcttatcgacgcgcgcgcggcc
aaggctccggcgaagaagaagccggcccgcaagaaggccgcggccaagaaggcgccggcg
aagaagcctgcggcaaagaagaaggcccccgcgaaaaaagccggcgcggaggagggggcg
tga
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