Altererythrobacter sp. B11: AEB_P1982
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Entry
AEB_P1982 CDS
T05671
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
alb
Altererythrobacter sp. B11
Pathway
alb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEB_P1982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alb03019
]
AEB_P1982
Enzymes [BR:
alb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AEB_P1982
Messenger RNA biogenesis [BR:
alb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AEB_P1982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BBC72850
UniProt:
A0A2Z5YXY6
LinkDB
All DBs
Position
2083231..2084622
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AA seq
463 aa
AA seq
DB search
MTFEQLGLSQSVLQALSLKGYETPSPIQQQAIPYVLEGRDLLGIAQTGTGKTAAFMLPSI
DRLVAADKRPQRRCCRMLVLAPTRELAGQIAQSAQDYARFAHLKIATVFGGTSVNRNRQD
LARGVDILIATPGRLVDLTDQGALDLGQVEVLVLDEADQMLDLGFIHALRQIVRMIPKQR
QTLFFSATMPKAIKDLASQYLTDPAQVSVAPAATTAERVEQYVCFVNQAEKQALLGIVLR
DGFKAGEMDRVLVFTRTKHGADRVVRKLAQGGMRANAIHGNKSQPQRERALGEFREGQVR
VLVATDIAARGIDITGVSHVINFELPNVPEQYVHRIGRTARAGREGVAISFCATDERDYL
RDIQKLTRVTLDKVELPENFRAEVEMVAARTPQAERAREEERDARPPRQGGGNRRPRRTA
EAKPRGGSGSGASGRPAGNSGNASRPGGNRRRRRSGGGSAPRA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgaacaactcggcctgtcgcagtccgtactccaggcactttccctcaagggc
tatgaaacgccgtcgccgatccagcagcaggcgatcccctatgtgctcgaagggcgcgac
ctgctgggcatcgcgcagaccggcacgggcaagacggcggccttcatgctgccctcgatc
gaccggctggtcgccgcggacaagcgcccgcagcggcgttgctgccgcatgctggtgctg
gcgcccacgcgcgagctggctggccagatcgcccagagcgcgcaggattatgcccgcttc
gctcatctgaagatcgccaccgtgttcggcggcacttcggtcaaccgcaaccggcaggat
ctggcgcgcggcgtcgatatcctcatcgccacgccgggccggctggtggacctgaccgat
cagggcgcgctcgatctcggccaggtggaagtgctggtgctggacgaggcggaccagatg
ctggacctcggcttcatccatgcactgcgccagatcgtgcggatgatcccgaagcagcgg
cagacgctgttcttctccgccaccatgcccaaggcgatcaaggatctggcgagccagtat
ctcaccgatccggcgcaggtttcggtcgcgcccgcggccaccacggcggagcgggtcgag
caatatgtgtgcttcgtcaaccaggcggaaaagcaggcgctgctgggcatcgtgctgcgc
gacggcttcaaggccggcgagatggaccgcgtgctggtgttcacccgcaccaagcatggc
gccgaccgcgtggtgcgcaagctggcgcagggcggcatgcgcgccaatgcgatccacggc
aacaagagccagccgcagcgcgaacgcgcgctgggcgagttccgcgaggggcaggtgcgc
gtgctggtggcgactgacatcgccgcgcgcggcatcgacatcaccggggtgagccatgtg
atcaatttcgagctgcccaatgtgcccgagcaatatgtccaccgcatcggccgcaccgcg
cgcgccgggcgcgagggggtggcgatttccttctgcgcgacggacgagcgggattatctg
cgcgacatccagaagctcacccgcgtgacgctggacaaggtcgagctgccggagaacttc
cgcgccgaagtggaaatggtcgccgcgcgcaccccgcaggccgagcgtgcccgcgaggaa
gagcgcgatgcgcgcccgccgcgccagggcggcggcaatcgccgtccgcgccgcaccgcc
gaagccaagccgcgtggcggcagcggcagtggcgcctcgggccgtccggcaggcaattcc
ggcaatgcgagccgccccggcggcaaccgccggcggcgccgttcgggcgggggttccgcc
ccccgcgcgtaa
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