Altererythrobacter sp. B11: AEB_P3175
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Entry
AEB_P3175 CDS
T05671
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alb
Altererythrobacter sp. B11
Pathway
alb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AEB_P3175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alb03019
]
AEB_P3175
03016 Transfer RNA biogenesis [BR:
alb03016
]
AEB_P3175
Enzymes [BR:
alb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AEB_P3175
Messenger RNA biogenesis [BR:
alb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AEB_P3175
Transfer RNA biogenesis [BR:
alb03016
]
Prokaryotic type
tRNA degradation factors
AEB_P3175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Vip3A_N
DUF2152
S1_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
BBC74043
LinkDB
All DBs
Position
complement(3416844..3419162)
Genome browser
AA seq
772 aa
AA seq
DB search
MFETKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVICQVLSY
DGETEADIVAMVAASAALTISGVPFMGPIGACRVGFVDGEYVLNPKQETALADGRLDLVV
AATHDAVMMVESEAKELTEEEMLGAVMFAHDESKKVVEAIIKLAEQAAKEPWEIDMSDDK
SAMKEELRGIIGKDIAAAYKLTDKSARSDALNAARAKAKAHYADADGQTQMTAGKLVKKL
EAEIVRTAILKDGSRIDGRKLDQVRPIEAMVGFLPRTHGSALFTRGETQAICTTTLGTKE
SEQMIDGLEGLSYQSFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPMLPSRED
FPYTIRILSDITESNGSSSMATVCGGCLSMMDAGVPIARPVSGIAMGLILEGDDFAVLSD
ILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITKEIMAKALEQAKGGRAHILNEMTKA
LGSARTELSAHAPRIETMQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISSS
DISQIEAARQWIQGIVEEPEVGKVYNGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVE
KPTDVVSEGQEVKVKVLEIDNRGKVRLSMRVVDQETGEELEDTRPPREPRGDRGDRGDRG
DKREGGRGGDRRGPRGGGGGGRDRGPRGGRDRDGGGKEGGDPDHLPAFLKED
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaacgaaaaccgtatcgctggagtggggcggaaagaccctcactctggaaacc
gggcgcatcgcgcgccaggccgatggcgccgtgctggcgacctatggcgaaaccgtggtg
ctgtgcgccgtcaccgccgcgaagagcgtgaaggaagggcaggatttcttcccccttacc
gtccactaccaggaaaaattctccgccgccggccgcattccgggcggcttcttcaagcgt
gagcgtggcgcgaccgagaaggaaacgcttaccagccgcctgatcgaccgcccgatccgc
ccgctgttccccgaagggttctacaacgagatcaacgtaatctgccaggtcctctcctat
gatggcgagaccgaggcggacatcgtggcgatggtggccgccagtgcggcgctgaccatt
tccggcgtgcccttcatggggccgatcggcgcctgccgcgtgggcttcgtggacggcgaa
tatgtgctcaacccgaagcaggaaaccgcccttgcggatggccgcctcgacctcgtcgtc
gctgccacgcacgacgcggtgatgatggtcgaatccgaagccaaggaactgaccgaggaa
gagatgctgggcgccgtcatgttcgcgcatgacgaaagcaagaaggtcgtggaagcgatc
atcaagctggccgagcaggccgccaaggagccgtgggaaatcgacatgtcggacgacaag
tccgccatgaaggaagagctgcgcggcatcatcggcaaggatatcgccgctgcctacaag
ctgaccgacaagtcggcccgttcggacgcgctcaatgcggcccgtgcgaaggcgaaggca
cattatgccgatgccgacggccagacgcagatgacggccggcaagctggtcaagaagctt
gaagccgaaatcgtgcgtaccgccatcctcaaggacggcagccgcatcgacggccgcaag
ctcgatcaggtccgcccgatcgaggcgatggtcggcttcctgccgcgcacccatggttcg
gcgctgttcacgcgcggtgaaacgcaggcaatctgcaccaccacgctgggcaccaaggag
tccgagcagatgatcgacggcctcgaaggcctgtcgtatcagagcttcatgctgcactat
aacttcccgccctattcggtcggcgaagtgggtcgcttcggcgctccgggccgtcgcgag
atcggccacggcaagctcgcctggcgcgcgctgcacccgatgctgccgagcagggaagac
ttcccctacacgatccgtatcctgtccgacatcaccgagagcaacggctcttcgtcgatg
gcgacggtgtgcggcggctgcctcagcatgatggatgccggcgtgccgatcgcgcgcccg
gtttcgggcatcgccatgggtctgatcctggaaggtgacgacttcgccgtgctgtccgac
atcctgggtgacgaagatcacttgggcgacatggacttcaaggtggccggcaccgaagcg
ggcatcaccagcctgcagatggacatcaagatcgctggcatcaccaaggaaatcatggcc
aaggcgctcgagcaggcgaagggcggccgcgcccatatcctgaacgagatgaccaaggcg
ctgggttccgcccgcaccgaactgtccgctcacgctccgcgcatcgaaacgatgcagatc
gacaagtccaagattcgtgacgtgatcggcacgggcggcaaggtgatccgcgagatcgtg
gccgaaaccggcgcgaaggtggatatcgatgacgaaggcgtgatcaagatctcgtccagc
gacatcagccagatcgaggctgcacgccagtggatccagggcatcgtggaagagcccgag
gtcggcaaggtctacaacggcaaggtcgtgaacatcgtcgatttcggcgccttcgtgaac
ttcatgggcggcaaggacggtctcgtccacgtttccgaaatgaagaacgagcgggtcgag
aagccgaccgacgtcgtgtccgaagggcaggaagtgaaggtcaaggtcctcgagatcgac
aaccgcggcaaggtccgcctgtcgatgcgcgtcgtggaccaggaaaccggcgaggagctg
gaggacacgcgtcccccgcgtgaaccgcgtggtgatcgtggcgaccgcggcgatcgtggc
gacaagcgcgaaggtggccgtggtggcgatcgtcgcgggccgcgtggcggcggcggcggt
ggccgggatcgcggaccccgcggcgggcgcgaccgtgacggcggcggcaaggaagggggc
gaccccgatcacctgccggccttcctgaaggaagactga
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