Acinetobacter lactucae: OTEC02_02230
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Entry
OTEC02_02230 CDS
T05220
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alc
Acinetobacter lactucae
Pathway
alc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OTEC02_02230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alc03021
]
OTEC02_02230
03400 DNA repair and recombination proteins [BR:
alc03400
]
OTEC02_02230
Enzymes [BR:
alc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OTEC02_02230
Transcription machinery [BR:
alc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OTEC02_02230
DNA repair and recombination proteins [BR:
alc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OTEC02_02230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ARD27714
LinkDB
All DBs
Position
451823..452830
Genome browser
AA seq
335 aa
AA seq
DB search
MTRTANEFLTPQAIKVEAVSGTSAKVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVE
IEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGPGDITAADLRLPHN
VEVVNPEHLIGTLSASGSLKMRLKVAQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKR
VSYTVENARVEQRTDLDKLVIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQTPVA
QEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtactgcaaacgagtttctaactccgcaagcgatcaaggtcgaagcggtaagc
gggacctcggcaaaagtgattctagaacctttagagcgtggttttggccatactctaggt
aatgctttacgtcgcattctattgtcttctttacctggcgctgctgtggttgaagtagag
atagaaggtgtcgagcacgagtacagtactttagaaggcttgcagcaggacatcgtcgag
ctcttgctgaacctaaaaggattgtctattaagctgttcgatcaaaatgaagcatattta
acattagaaaaacaaggtcctggcgatattactgctgctgaccttcgtttacctcataat
gttgaagtggttaacccagaacatttaatcggtactttaagtgcttcaggctcattaaaa
atgcgcttgaaagttgctcaaggtcgtggttatgaaacatctgattctcgtttccctgaa
ggtgaaacacgccctgttggtcgtttacagttagatgcttcttatagcccgattaaacgt
gtttcttacaccgttgaaaatgcgcgtgtagaacaacgtaccgacttagataaactggta
atcgaccttgaaacaaatggaacggttgatcctgaagaagcaatccgtaaagcggcaaca
atcttgcaacaacaaattgcaatttttgttgatcttcagaaagaccaaactccagttgct
caagagcctcgtgaagaagttgacccaatcttgcttcgcccagtagatgatctagagctt
actgttcgttctgctaactgtttgaaagcagaaaatatttactacattggtgatcttgtt
caacgtactgaagttgagttgttaaaaactcctaaccttggtaaaaaatcgttaacagag
atcaaagatgttttggcatcgaaaggcttacaactcggtatgcgtcttgaaaactggcca
ccagctagtcttcgtatggacgaccgttttgcctatcgtagccgttaa
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